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An in Vivo Analysis of the vestigial Gene in Drosophila melanogaster Defines the Domains Required for Vg Function
Julie O. MacKaya,c, Kelly H. Soanesa,c, Ajay Srivastavaa, Andrew Simmondsb, William J. Brookc, and John B. Bellaa Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada,
b C. H. Best Institute, University of Toronto, Toronto, Ontario M5G1L6, Canada
c Department of Biochemistry and Molecular Biology, University of Calgary, Calgary, Alberta T2N 4N1, Canada
Corresponding author: John B. Bell, University of Alberta, Edmonton, AB T6G 2E9, Canada., jbell{at}ualberta.ca (E-mail)
Communicating editor: T. SCHÜPBACH
| ABSTRACT |
|---|
Considerable evidence indicates an obligate partnership of the Drosophila melanogaster Vestigial (VG) and Scalloped (SD) proteins within the context of wing development. These two proteins interact physically and a 56-amino-acid motif within VG is necessary and sufficient for this binding. While the importance of this SD-binding domain has been clearly demonstrated both in vitro and in vivo, the remaining portions of VG have not been examined for in vivo function. Herein, additional regions within VG were tested for possible in vivo functions. The results identify two additional domains that must be present for optimal VG function as measured by the loss of ability to rescue vg mutants, to induce ectopic sd expression, and to perform other normal VG functions when they are deleted. An in vivo study such as this one is fundamentally important because it identifies domains of VG that are necessary in the cellular context in which wing development actually occurs. The results also indicate that an additional large portion of VG, outside of these two domains and the SD-binding domain, is dispensable in the execution of these normal VG functions.
PROPER development of the wing in Drosophila melanogaster involves the coordinate action of several genes. One of the central genes involved in this process is vestigial (vg). The vg gene is a target of both the decapentaplegic (dpp) and Notch (N)/wingless (wg) pathways and patterned vg expression occurs throughout the entire wing field (![]()
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Genetically, vg is known to interact with scalloped (sd), another important wing-patterning gene. Indeed, vg must act in partnership with sd to manifest selector gene ability (![]()
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While the importance of the SD-binding domain of VG has been demonstrated clearly both in vitro and in vivo (![]()
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| MATERIALS AND METHODS |
|---|
Drosophila stocks:
All stocks and crosses were raised at 25°. The vg1 , vg83b27, and vg83b27R alleles were from our local collection. The ptcGal4 and sd-lacZ strains were a gift from S. Carroll.
Construction of
vg deletions:
All deletions were constructed using inverse PCR in either pUC19 (![]()
![]()
vg constructs were cloned into pUAST (![]()
Inverse PCR:
The following Taq:Pfu (20:1) PCR protocol with appropriate primer combinations was used: 94° for 5 min (hot start), followed by 35 cycles of 94° for 30 sec, 68° for 7 min, and holds at 72° for 3 min and then 4°. The total reaction mix was 30 µl, and the full-length vg ORF (in pET16b or pUC19) was used as template.
Micro-injections:
Micro-injections were performed as described in ![]()
vg deletions in pUAST and helper
2-3. Two or more independent transgenic lines of each deletion construct were obtained and used in subsequent assays.
Ectopic expression assay:
The UAS-Gal4 system was utilized (![]()
vg constructs ectopically, each was crossed to sd-lacZ; ptcGal4 flies (driven by ptcGal4). The resulting larvae were stained with X-gal to assess the ability of ectopic vg to induce ectopic sd expression (assayed with a sd lacZ reporter). X-Gal staining was performed for 1.5 hr as described in ![]()
Flp-out clones:
Flp-out clones (![]()
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Antibody staining:
Antibody staining was performed as described in ![]()
Rescue assays:
To assess the ability of each
vg deletion construct to rescue each of three vg mutants (vg83b27, vg83b27R, or vg1; ![]()
vg lines were made homozygous and the corresponding chromosomal location of each insert was determined (data not shown). From these transgenic lines, UAS
vg; vg lines were generated and crossed to a vgGal4; vg line. Progeny from this cross were scored for the extent of wing tissue restoration. Since the parental lines were homozygous for either vg1 or vg83b27 or were heterozygous for vg83b27R/Balancer, any increase in the amount of wing tissue in the homozygous offspring could be attributed to the function of the respective UAS
vg constructs.
| RESULTS |
|---|
The deletion constructs used herein are labeled according to the primer combinations that were used in their construction along with a
symbol to designate that each is a partial deletion of the vg ORF. A schematic of the deletions made within the vg ORF and the corresponding deleted amino acids is shown in Fig 1. The shaded bars indicate regions that are still present while open bars indicate the regions that are deleted. The previously identified SD-binding motif of the VG protein (amino acids 281335) is also indicated in Fig 1, and several of the constructs include this motif within the deleted portion.
|
The ability of each UAS
vg transgene to induce sd was assessed by X-gal staining for the product of a sd-lacZ reporter in third instar larvae containing this reporter, the UAS
vg transgene, and a ptcGal4 driver. A sd-lacZ reporter has been shown previously to be activated by the presence of ectopic transgenic VG (![]()
vg X sd-lacZ; ptcGal4 crosses. While some constructs were deleted for the anti-VG epitope (
4-10,
4-8, and
2-8), all constructs that encoded proteins that were amenable to antibody detection (full-length vg,
5'-5,
5'-6,
5'-7,
1-2,
1-4, and
7-8) showed ectopic expression of the vg transgene. A representative wing disc from this group (
1-4) was utilized to detect VG with antibody staining and is shown in Fig 2C. N-terminal deletion constructs
5'-5,
5'-6, and
5'-7 (which delete amino acids 265, 2170, and 2278, respectively) are still able to induce sd expression, but this ability is very weak (Fig 2D) compared to the level of sd-lacZ staining induced by expression of full-length VG (Fig 2A). C-terminal deletion constructs able to induce ectopic expression activity included
1-2 and
1-4 (amino acids 335426 and 356453 deleted, respectively). Wing imaginal discs from flies expressing these constructs (Fig 2E) show a somewhat stronger X-gal stain than that of the N-terminal deletion constructs (Fig 2D), but much less than that produced by full-length UAS-vg. The one internal deletion construct that could induce ectopic expression of sd-lacZ was
7-8 (amino acids 187278 deleted). Interestingly, in this case, the level of sd-lacZ activation (Fig 2F) appears comparable to that induced by the full-length vg construct. None of the remaining deletion constructs caused activation of sd-lacZ (data not shown) and thus were similar to the negative control staining produced by the pUAST vector alone. The discs presented in Fig 2A–F, were selected for staining in the wing blade portion only and the variability in the endogenous pattern in the notum is not reproducible. The ability of the various deletion constructs to ectopically induce sd is summarized in Fig 1. Multiple transgenic lines (from 2-6) were assayed for each deletion construct and no significant differences were observed between different transgenic lines for the same construct. As expected, all of the UAS-vg constructs that were deleted for the SD-binding domain had no activity in the ectopic sd expression assay (see Fig 1) and these constructs were also negative with respect to showing ectopic production of VG as detected with anti-VG antibody. Thus, the ability to bind SD is a dominant prerequisite in assessing any other aspect of VG function in vivo.
|
The ectopic expression of vg provides another assay of VG function in vivo. It has been established that expressing VG in tissues where it is not normally present, but where SD is present, results in the production of ectopic wing tissue (![]()
vg constructs. A representative from each vg deletion group that was able to induce at least some ectopic sd expression was compared to a full-length UASvg construct with respect to being able to produce ectopic wing tissue in the eyes. As expected, full-length vg did produce ectopic tissue and UAS
vg7-8 also exhibited this ability at a similar level (results not shown). However, the loss of either the 5' putative activation motif (using UAS
vg5-5) or the 3' activation motif (using UAS
vg1-4) abolished the ability to produce the ectopic outgrowths in the eye, thus indicating the importance of having both of these regions for normal function. Normal VG function may also be visualized in mitotic clones produced using Flp-out technology (![]()
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vg constructs are used to induce ectopic wg expression, loss of either the 3' (using UAS
vg1-4) or the 5' putative activation domain (using UAS
vg5-6) results in the inability to induce ectopic wg (Fig 3, AF). However, the UAS
vg7-8 construct behaves like full-length vg in retaining this ability (Fig 3, GL). Deletion of either of the putative activation domains results in clones that fail to grow (smaller compared to wild-type vg), have an irregular shape (demonstrating the existence of adhesive differences within the clones), and are unable to induce wg bordering the clones that overlap the hinge region (Fig 3, AF). The opposite behavior is exhibited by clones from a UAS
vg7-8 or a UASvg full-length genetic constitution (Fig 3, GL). Not only are the clones larger with smoother borders, but also functional VG-expressing clones can induce wg expression non-cell autonomously in some clones that overlap the hinge region of the disc (see arrowheads in Fig 3H, Fig I, Fig K, and Fig L). This assay again emphasizes the functional importance of the two putative activation domains in vivo in the fulfillment of normal VG functions.
|
While the ectopic sd expression assay or ectopic vg assay provides a quick method to map potential activation domains within VG, the ability of these deleted proteins to substitute for normal VG function needed to be examined as well. Thus, each of the deleted transgenes was also tested for the ability to rescue the phenotypes of vg83b27 and vg1 homozygous flies. The vg83b27 mutant stems from a deletion within intron 2 that includes the vg boundary enhancer (vgBE), and flies homozygous for this allele have virtually no wings. The vg1 mutant phenotype is less severe and is caused by the insertion of a 412 transposon into intron 3. However, since these two vg alleles retain some vg function, the vg83b27R null allele was also included in the rescue assay. The ability of each deletion construct to rescue each of these three vg mutants was assessed by comparing the progeny from a cross of UAS
vg; vg x vgGal4;vg to the phenotypes of flies homozygous for the respective vg tester allele. In the case of vg83b27R, the homozygous vg progeny were selected from a cross of vg83b27R vgGAL4/Cy x vg83b27R UAS
vg/Cy. The rescue of vg83b27 by the full-length UAS-vg construct is shown in Fig 4A and that of vg1 in Fig 5A, and these results are also summarized in Fig 1. The same negative control (pUAST construct alone) was used in these rescue experiments as in the ectopic sd assay. No wing tissue restoration was observed in the control flies (results not shown). In each case, a correlation was observed between the ability to induce ectopic sd expression and the ability to rescue each vg mutant phenotype. For vg83b27, deletion constructs
5'-5,
5'-6, and
5'-7 were able to produce only a partial rescue, as shown in Fig 4B for
5'-5. The rescue ability of deletion constructs
1-2 and
1-4 was also only partial (Fig 4C for
1-4) while that of
7-8 was virtually complete (Fig 4D). The vg1 mutant phenotype was not rescued as completely as vg83b27, but the level is still substantial. Moreover, in each case, the relative ability of the deletion constructs to rescue vg1 correlates with that observed for vg83b27 (Fig 5, BD vs. Fig 4, BD), so all rescue results are summarized in Fig 1. Again, there were no notable differences in the degree of rescue when comparing multiple transgenic lines for a particular deletion construct. Selected rescue data for the vg83b27R mutant are portrayed in Fig 6 and these data agree with those for the two leaky vg alleles. Only the constructs representing regions that exhibited partial rescue activity for the other two alleles are portrayed for vg83b27R, since all other constructs were completely negative. As expected, even the constructs that gave partial rescue of vgBG and vg83b27 did not rescue vg83b27R as well (Fig 6, AC vs. DI). The UAS
vg7-8 was unable to produce a full rescue of vg83b27R (Fig 6J and Fig K) but a full-length vestigial construct is also unable to rescue this allele fully (results not shown). Since vg
7-8 and wild type still behave similarly, this partial rescue is likely a reflection of the relative strength of the vgGAL4 driver. Note that there is considerable rescue of the anterior bristles using vg
7-8, which is not as apparent with vg
1-4 and not observed with vg
5-5 (Fig 6E vs. H and K).
|
|
|
In these assays, the SD-binding domain (amino acids 281335) as well as N-terminal amino acids 165 (called domain 1) and C-terminal amino acids 335453 (called domain 2) are required for optimal VG activity. The general location of the these domains identified by in vivo experiments correlates well with the domains located by in vitro experiments (![]()
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7-8) exhibited virtually the same levels of ectopic sd expression and rescue ability of the leaky vg alleles as those of full-length vg, neither it nor wild-type could fully rescue vg83b27R. Further, since the ectopic behavior of vg
7-8 is also concordant with other activities associated with ectopic expression of wild-type vg, such as wing outgrowths in eye tissue or induction of wg, the failure to rescue vg83b27R is not likely due to the nature of the vg
7-8 deletion. When full-length VG was compared to the protein produced by vg
7-8 with respect to folding ability using a computer-based analysis (![]()
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7-8. However, since the protein encoded by this deletion construct behaves with virtual wild-type activity, one can infer that this motif is either nonfunctional or not required for full-length VG function. Furthermore, it is likely that VG enters the nucleus via its ability to bind to SD and utilizes the nuclear localization signal therein (![]()
| DISCUSSION |
|---|
The results presented herein are consistent with an in vivo role of VG acting as a transcriptional activator in Drosophila cells in conjunction with binding to SD. It was already known that ectopic expression of vg induces the ectopic expression of sd in the same pattern. Further, it was also known that an expressed vg construct lacking the ability to bind SD was also unable to induce ectopic sd expression (![]()
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From our results using ectopic sd-lacZ induction, the ability to rescue vg mutations, and the ability to carry out other functions associated with normal vg, it can be discerned that certain portions of the vg ORF, in addition to the SD-binding domain, are necessary to accomplish normal VG function. These appear to be the critical regions, as other portions can be deleted without effect. More specifically, the N-terminal amino acids (approximately the first 65) and C-terminal residues from 335 to 453 seem to play an important role in the induction of sd-lacZ. When the N-terminal deletion
5'-5 (deleting amino acids 265) is assayed, the ectopic expression ability is reduced markedly compared to that seen with the full-length vg construct, although it is not eliminated completely. Moreover, the larger N-terminal deletions (amino acids 2170 and 2278, respectively) do not further lower the ability to express sd. Thus, it seems that the fundamentally important region is already removed with the
5'-5 construct. For C-terminal deletions
1-4 and
1-2 (amino acids 356453 and 335426, respectively), the ability to ectopically express sd is much less than that produced by full-length vg but somewhat stronger than that produced when the N-terminal deletion constructs are assayed. Deletions
5'-5,
5'-6, and
5'-7 retain the encoded amino acids missing from
1-4 and
1-2 and vice versa. Taken together, these data suggest the presence of two important functional domains for VG: one within amino acids 165 (domain 1) and the other within amino acids 336453 (domain 2). See Fig 1 for the position of these domains within the VG protein. Although the precise boundaries of these domains have not yet been determined, domain 1 is very likely within the first 65 amino acids (deleted in vg
5'-5) since this is the region most highly conserved between D. melanogaster and the mosquito Aedes egyptii (![]()
vg 5'-6 and 5'-7 is no stronger than that exhibited by UAS
vg 5'-5, which deletes the first 65 amino acids only. The activity of domain 2 appears to be weaker, since domain 1 deletions produce a slightly more drastic impairment of VG function than do domain 2 deletions (amino acids 356453 or 335426). However, homology between Drosophila and mosquito VG is also high within the SD-binding domain of VG and, in fact, remains strong to the carboxyl terminus of VG (82% identity from residue 335 to 453; ![]()
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The
7-8 construct (deleting amino acids 187278) behaves similarly to full-length vg in all assays reported herein even though the encoded protein lacks 91 amino acids present in normal VG. Thus, a significant portion of the VG protein can be absent without any obvious impairment of functions associated with this protein. This portion of the protein has no homology to other known proteins, including vertebrate VG homologs, and is not predicted to contain any well-defined structural motifs. Thus, the function of this segment, comprising 20% of normal Vg, remains unknown at this time.
While the ectopic sd-lacZ assay illustrates the ability of each region to activate transcription of sd, the ability to rescue the vg mutants (vg83b27, vg83b27R, and vg1 ) was also assessed to confirm that these regions are required for the majority of VG-mediated activation of downstream genes. All deletion constructs that were able to rescue vg83b27 mutants were also able to rescue vg1 mutants, and these same constructs were the ones that retained the ability to ectopically induce sd. As expected, the constructs that could accomplish some rescue of the leaky vg alleles were able to rescue vg83b27R to a lesser extent, but this merely strengthens the conclusion that the respective deleted regions are essential for in vivo VG function. Furthermore, the relative ability of the constructs to induce the ectopic expression of sd correlates with their relative ability to rescue the wing phenotypes of the tester vg alleles. The full-length vg construct gives almost complete rescue of vg83b27 but rescues vg1 to a lesser extent and vg83b27R to an even lesser extent. The most likely explanation for incomplete rescue of vg1 and vg83b27R is the vgGAL4 line that was used in these experiments. It was constructed (S. MORIMURA and M. HOFFMANN, unpublished results) by excising the vg gene intron 2 boundary enhancer region (![]()
![]()
![]()
The SD-binding domain (residues 278335) has already been shown to be necessary and sufficient for binding of SD and TEF-1 (![]()
7-8) does not result in any obvious impairment of VG function. Although the removal of either putative activation domain does not completely destroy the ability of VG to execute its functions, these functions are impaired considerably. This could be interpreted as a partial functional redundancy or, more likely, it could be interpreted that both domains are required for full normal function. Future efforts will be directed toward identifying a possible functional role for the portion of the VG protein that appears to be dispensable from the results of the present study. Studies aimed at identifying additional protein-protein interactions with VG may be able to implicate this region in other aspects of VG function.
| ACKNOWLEDGMENTS |
|---|
We thank Shelagh Campbell for suggestions and a critical reading of the manuscript and Sean Carroll for reagents. We also thank Sandra O'Keefe for help in the preparation of the figures. This research was supported by a NSERC Canada grant to J.B.
Manuscript received October 16, 2002; Accepted for publication January 3, 2003.
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