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The Ca2+-Calmodulin-Activated Protein Phosphatase Calcineurin Negatively Regulates Egf Receptor Signaling in Drosophila Development
Kathleen M. C. Sullivana and Gerald M. Rubinaa Department of Molecular and Cell Biology and Howard Hughes Medical Institute, University of California, Berkeley, California 94720-3200
Corresponding author: Kathleen M. C. Sullivan, Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720., kmcs{at}uclink4.berkeley.edu (E-mail)
Communicating editor: K. GOLIC
| ABSTRACT |
|---|
Calcineurin is a Ca2+-calmodulin-activated, Ser-Thr protein phosphatase that is essential for the translation of Ca2+ signals into changes in cell function and development. We carried out a dominant modifier screen in the Drosophila eye using an activated form of the catalytic subunit to identify new targets, regulators, and functions of calcineurin. An examination of 70,000 mutagenized flies yielded nine specific complementation groups, four that enhanced and five that suppressed the activated calcineurin phenotype. The gene canB2, which encodes the essential regulatory subunit of calcineurin, was identified as a suppressor group, demonstrating that the screen was capable of identifying genes relevant to calcineurin function. We demonstrated that a second suppressor group was sprouty, a negative regulator of receptor tyrosine kinase signaling. Wing and eye phenotypes of ectopic activated calcineurin and genetic interactions with components of signaling pathways suggested a role for calcineurin in repressing Egf receptor/Ras signal transduction. On the basis of our results, we propose that calcineurin, upon activation by Ca2+-calmodulin, cooperates with other factors to negatively regulate Egf receptor signaling at the level of sprouty and the GTPase-activating protein Gap1.
THE only protein phosphatase regulated by both Ca2+ and calmodulin, calcineurin is a key player in Ca2+ signal transduction from yeast to humans and has been implicated in a wide array of processes, from disease progression to development (for a general review, see ![]()
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The enzyme consists of an
60-kD catalytic subunit, calcineurin A (canA), bound to the regulatory subunit, calcineurin B (canB), a 19-kD EF-hand Ca2+-binding protein (reviewed in ![]()
A Ca2+-calmodulin-independent, constitutively active phosphatase is made by deleting the canA regulatory region (![]()
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Calcineurin is activated by a sustained increase in intracellular Ca2+ levels that can result from the opening of intracellular Ca2+ channels in response to phosphoinositide (PI) signaling (reviewed in ![]()
by receptor tyrosine kinases (RTK). PI-PLCs cleave phosphatidylinositol 4,5-bisphosphate (PIP2) to yield inositol 1,4,5-trisphosphate (InsP3), which then activates the InsP3 receptor Ca2+ channel.
GPCRs and RTKs activate an integrated signaling network that includes the Ras/mitogen-activated protein (MAP) kinase cascade, PI3-kinase, and the small GTPase Rho. Depending upon the cellular context, these pathways can antagonize or cooperate with each other and with PI signaling. For example, T-cell activation requires the activation of both NFAT, which is transduced to the nucleus upon dephosphorylation by calcineurin, and AP1, which acts downstream of Ras and MAP kinase (![]()
Conversely, PI signaling has been found to antagonize the Ras pathway in Drosophila. The Egf receptor and Ras/MAP kinase cascade are essential for formation of wing veins and photoreceptor (R) cells in the eye. Mutations in the single phospholipase C
gene, small wing (sl), cause the formation of extra R7 cells and wing vein material (![]()
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-generated InsP3 is converted to InsP4, which then activates Gap (![]()
The Drosophila genome contains three canA genes and two canB genes that are 75 and 88% similar to the vertebrate genes, respectively. To date, no mutants have been described for any of the five genes. To study calcineurin function in Drosophila, we expressed a constitutively active form of canA during imaginal development and examined the resulting phenotypes. The activated calcineurin rough eye phenotype was used to perform a genetic modifier screen. We were able to successfully isolate and characterize specific enhancers and suppressors and identified two suppressors as canB2 and sprouty. The activated calcineurin rough eye was also tested extensively for genetic interactions with an array of signaling cascades. Taken together, the genetic evidence is consistent with calcineurin functioning as a negative regulator of Egf receptor/Ras signaling during imaginal development, possibly in the same pathway as PLC
.
| MATERIALS AND METHODS |
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Stocks:
The following published stocks were used in this study: Egfrf2 (![]()
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Calcineurin constructs:
The constitutively active form of canA, canAact, was made from the canA gene Pp2B-14D (![]()
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Modifier screen:
The canAact.gl transgene was inserted onto TM3 (TCAG) and CyO (CCAG) by crossing canAact.gl;TM3 to CyO/Sp;Ki,Ths.PR
2-3. The canAact.gl/CyO;TM3/Ki,Ths.PR
2-3 progeny were outcrossed to a w1118 line and individual CyO, or TM3, Ki+ males with rough eyes were selected. Upon confirmation that canAact.gl segregated with TM3 or CyO, TCAG/e ftz ry or CGCA/Adv stocks were established. The presence of canAact.gl on TM3 was also confirmed by PCR and by Western blot using canA monoclonal antibodies (K. SULLIVAN, unpublished results). TCAGB was made and confirmed similarly, except that canBgl/CyO;TCAG was used in the starting cross. The isogenic line used in the screen was prepared from a w1118 stock by using standard procedures (![]()
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Adult eye microscopy:
Scanning electron microscopy (SEM) was carried out on adult flies with an environmental SEM in wet mode. Samples were prepared as described (![]()
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Characterization of the canB2 suppressor group:
Genomic DNA was made from the chromosome 2, suppressor group 1 allele 87 by isolating mutant first instar larvae from a CS2-187/CyO-GFParm line (![]()
Sequencing sprouty:
Primers were designed to amplify 700- to 800-bp overlapping fragments that spanned the sty ORF, which is contained within a single exon. Genomic DNA was isolated from the isogenic parent line and from embryos homozygous for the CS3-3 EMS allele ECE(3)518 by using an ECE(3)518/CyO-GFParm line. After PCR amplification, the fragments were purified by using the QIAquick PCR purification kit and then directly sequenced. The sty ORF from the isogenic line was identical to the sequence reported in ![]()
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| RESULTS |
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Activated calcineurin constructs:
We selected the canA gene Pp2B-14D for our experiments because it is expressed throughout development, including in eye discs (![]()
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An activated form of Pp2B-14D, canAact, was made by deleting the autoinhibitory and calmodulin-binding domains (![]()
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Flies carrying one copy of the canAact.gl transgene had mild rough eyes compared to wild type (Fig 1A and Fig B), and the eyes of flies carrying two copies exhibited a stronger phenotype (data not shown). Consistent with observations in other systems, both full-length canA and activated canA without a functional canB-binding domain did not cause any detectable phenotypes when expressed throughout development (data not shown).
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Removing one copy of glass by introducing the null allele gl60J (![]()
Reducing the dosage of canB-4F or canB2 by introducing deficiencies that uncover the 4F or 43E genomic region resulted in suppression of the canAact.gl rough eye (Fig 1E and data not shown). Western blots confirmed that canB protein is present in the eye disc (data not shown); however, it is not known whether the protein is derived from one or both canB genes. Consistent with the effect of reduced canB levels, canB4Fgl, which alone has no phenotype (data not shown), increased the severity of the canAact.gl rough eye (cf. Fig 1F).
Because expression occurs throughout the later stages of eye development, glass-dependent transgenes can affect many different processes. On the basis of our observations, activated calcineurin may have multiple effects on the differentiation and morphology of photoreceptor and other cell types (data not shown; see also Fig 3F). However, we did not observe an effect of canAact.gl on cell proliferation or cell death (data not shown).
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Dominant modifier screen:
The canAact.gl rough eye phenotype was modifiable; i.e., it was sensitive to transgene dose and was specifically modified by canB, which is essential for canA function. Thus, the rough eye was a good candidate for a dominant modifier screen. We prepared an isogenic wild-type stock and inserted canAact.gl onto the chromosome 3 balancer TM3 (Fig 1B and Fig D), which carries the dominant visible marker Sb. We screened 70,000 progeny of TM3-canAact.gl (TCAG) females and EMS- or X-ray-treated males (Fig 2). Each individual F1 with an enhanced or suppressed TCAG rough eye was backcrossed to TCAG to confirm the modification and to determine the chromosomal location. About 21% of the modifiers initially isolated bred true, and stable lines of the confirmed modifiers were established over either TCAG or the chromosome 2 balancer CCAG (CyO-canAact.gl). Because chromosome 2 balancers, including CyO, harbor one or more suppressors of the TCAG phenotype (data not shown), chromosome 2 suppressors were difficult to balance and are thus underrepresented in the final tally. Modifiers on chromosome 1 were also underrepresented, in part because the balancers carry a dominant eye mutation, Bar, that significantly interfered with scoring TCAG modification. A total of 5 viable and 123 lethal modifiers were isolated in the screen (Table 1).
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Of the 123 lethal modifiers, 62 fell into 11 complementation groups and the rest (61) were single hits (Table 2). Examples of the suppression and enhancement of canAact.gl by the complementation groups are illustrated with SEMs and sagittal eye sections (Fig 3). Compared to TCAG alone (Fig 3B and Fig F), CE3-3 (calcineurin enhancer, chromosome 3, group 3)/TCAG eyes had increased exterior roughness (Fig 3C) and increased disruption of the number and organization of the photoreceptor and support cells (Fig 3G). CS3-1 (calcineurin suppressor, chromosome 3, group 1) was the largest suppressor group, and both SEMs and eye sections of CS3-1/TCAG alleles (Fig 3D and Fig H and data not shown) revealed that, as expected, it reverted the TCAG phenotype toward wild type (Fig 3A and Fig E). Other suppressor groups had similar effects on the TCAG rough eye (Fig 5 and data not shown).
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Modifier groups that act directly on the glass enhancer do not specifically modify canAact.gl. Nonspecific groups were identified by testing whether any of the complementation groups modified rough eyes caused by unrelated, glass-dependent transgenes. Two of the enhancer groups, CE3-1 and CE2-1, modified rough eye phenotypes caused by other glass-dependent transgenes, such as sinagl, a Ras pathway component, and Rho1gl (Table 2). All complementation groups were additionally tested with Rasv12, phyllopod, yanact, and reaper glass-dependent transgenes (data not shown), but only CE3-1 and CE2-1 modified the rough eye phenotypes caused by these transgenes.
We further separated the specific modifier groups into two classes by determining whether they modified the canAact.gl rough eye phenotype caused by TCAGB (TM3-canAact.gl,canBgl). Class I genes, such as Ca2+ signaling components or dephosphorylation targets, act downstream of calcineurin and will modify the rough eye phenotype of TCAG and TCAGB. However, class II groups, which act at the level of canB, such as canB or factors that regulate its expression, will modify TCAG but not TCAGB. Only two groups, CE3-3 and CS2-1, failed to modify TCAGB (Table 2). Class I and class II modifier groups were mapped by meiotic recombination and by failure to complement deficiencies. The results from both methods were used to estimate the cytological map position of each group (Table 2).
Suppressor group CS2-1 is canB2:
Meiotic mapping localized the class II group CS2-1 to 44A;50B, and deficiencies refined the region to 42B3;43E18. Polytene chromosome analysis revealed a large deficiency in CS2-1128 that uncovered 43E6;44B1 (Fig 4). CS2-187 was an inversion with breakpoints at 43A1-2 and 43E13-18 (Fig 4). The left breakpoint of CS2-187 fails to complement two independent alleles of pk, a gene in 43A1 that is required for tissue polarity in the wing, haltere, and notum (![]()
One of the canB genes, canB2, maps to 43E16 and was a strong candidate for CS2-1. The CS2-1128 deficiency uncovered canB2, since CS2-1128/CyO,cn flies were cn, indicating that the deficiency breaks to the left of cn. PCR on genomic DNA from homozygous CS2-187 flies revealed that the right breakpoint of the insertion occurred between base pair positions -452 and +60, relative to the canB2 start of transcription (Fig 4, data not shown). The gene on the left side of the breakpoint, cn, was not disrupted in CS2-187, because CS2-187/CyO,cn flies were cn+. Additionally, Western blots of homozygous CS2-187, CS2-1128, and CS2-1180 larvae that were probed with canB antibodies revealed that, compared to similarly staged controls, total canB protein levels were reduced in CS2-1 alleles (data not shown).
Rescue was carried out by using the UAS-GAL4 system (![]()
Suppressor CS3-3 is sprouty:
Deficiency mapping localized CS3-3 (Fig 5) to 63C6;63E, and the X-ray allele CS3-3154 had a deletion spanning 63C2-5;63E1-4 (data not shown). The EMS allele CS3-3518 (Fig 5B and Fig E) failed to complement sty
5 and sty
64 (![]()
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Sprouty is a negative regulator of RTK signaling in Drosophila, including Fgf receptor and Egf receptor signaling (![]()
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Calcineurin and Egf receptor signaling:
Increased signaling through the Egf receptor, caused by either the presence of ectopic Egfr/Ras signaling components or hypomorphic mutations in negative regulators, results in the development of extra photoreceptors and wing vein material (![]()
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To examine the interaction between calcineurin and individual components of the Egfr pathway, we tested the ability of mutations in these components to modify the activated calcineurin phenotype (Table 3 and data not shown). While most downstream components of the pathway did not modify activated calcineurin, hypomorphic mutations in Egfr, Ras, pnt, sty, Gap1, and sl did (Fig 7). TCAGB (Fig 7A) was enhanced by removing one copy of Egfr, Ras, or pnt (Fig 7, BD) and was suppressed by Gap1 and sl (Fig 7E and Fig F). Both TCAGB and TCAG suppressed the rough eye caused by hypermorphic Egfr alleles: flies that have one copy of EgfrE1 (Fig 7G) and TCAGB (Fig 7A) have a rough eye that closely resembles that of TCAGB alone (Fig 7H). TCAG was not detectably modified by hypomorphic Egfr, Ras, or pnt alleles (data not shown). Aside from CS3-3, none of the modifier groups corresponded to Egf receptor/Ras signaling components that genetically interacted with TCAG (data not shown). However, it is possible that these genes are present among the 61 single hits, which have not been characterized. We also tested for genetic interactions with other signaling pathways by crossing to two Rho1 alleles, as well as mutants in components of the Notch and wingless pathways, but no convincing interactions with TCAGB or TCAG were detected (data not shown).
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| DISCUSSION |
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Specificity of activated calcineurin in Drosophila development:
Several lines of evidence demonstrate that phosphatase activity is required for ectopic canAact phenotypes in Drosophila. Genetically raising or lowering the level of canB, which is essential for activity, respectively enhanced or suppressed the phenotype of canAact. Transgenic flies expressing a form of canAact that lacks an intact canB-binding site were indistinguishable from wild-type flies. Finally, the full-length phosphatase, which is inactive in the absence of Ca2+-calmodulin, did not have a detectable phenotype when overexpressed throughout development.
Activated calcineurin has been used reliably to identify physiologically relevant functions of calcineurin in a number of systems (![]()
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Activated calcineurin A modifier screen:
The canAact.gl screen yielded 11 complementation groups, 9 of which failed to modify rough eyes caused by other glass-induced transgenes. This demonstrates that the majority of our modifier groups do not act through the glass enhancer. We then divided the nine specific modifiers into class I genes, which act downstream of calcineurin, and class II genes, which act at the level of canB.
Consistent with this classification, the class II group CS2-1 is canB2. The allele CS2-187 had an inversion that breaks within 400 bp of the canB2 start of transcription. CS2-187 and CS2-1180 had decreased protein levels compared to similarly staged controls. Finally, the lethality of CS2-1180 was partially rescued by canB-4F. The ability of canB-4F to rescue the canB2 lesion suggests that the canB-4F protein can at least partially substitute for canB2. More importantly, isolation of the calcineurin regulatory subunit in the canAact.gl modifier screen demonstrates that the screen is capable of identifying genes that are required for calcineurin function.
The class I modifier group CS3-3 failed to complement the hypomorphic sprouty alleles sty
5 and sty
64; both sty
5 and sty
64 also suppressed canAact.gl; and the sty gene from CS3-3518 harbored a nonsense mutation (Q250Stop). Therefore, we conclude that the CS3-3 complementation group is sprouty. The fact that sty falls into the class II group suggests that sprouty functions downstream of calcineurin and/or in a parallel pathway.
Cross-talk between calcineurin and Egf receptor signaling:
Two lines of evidence suggest that calcineurin is a negative regulator of Egf receptor/Ras signaling. First, a negative regulator of RTK signaling, sprouty, was isolated as a suppressor of the canAact.gl rough eye phenotype in the dominant modifier screen. Both sprouty and canAact suppressed wing vein formation and reduced the number of photoreceptor cells per ommatidium (![]()
A thorough examination of genetic interactions between canAact and components of RTK and other signaling pathways confirmed that canAact specifically represses the Egf receptor/Ras pathway and that it acts upstream in the pathway. The lack of convincing genetic interactions with other signaling pathways in the imaginal eye disc does not rule out a role for calcineurin in these pathways in other developmental contexts. With the exception of pnt, activated calcineurin was not modified by components downstream of Ras and was modified only by a subset of genes that act between the Egf receptor and Ras. While Gap1 and sty alleles modified activated calcineurin, drk and cbl did not. Thus calcineurin may act downstream of, or parallel to, drk and cbl. The more downstream components of the Ras/MAP kinase pathway may not interact with activated calcineurin because they are too far removed from the point(s) of intersection between calcineurin and the pathway. Alternatively, these components may not be limiting, so that reduction of gene dose, which is the basis of a dominant modifier screen, would have no appreciable effect.
The hypermorphic allele EgfrE1 inhibits Ras signaling (![]()
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Consistent with our findings, PLC
is a negative regulator of Egf receptor/Ras signaling in eye and wing development (![]()
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was identified in this study as a strong suppressor of activated calcineurin, although biochemically PLC
has been placed upstream of calcineurin in the PI signaling pathway. One explanation is that PLC
acts on one of the other canA genes. Another possibility is that the signaling pathways activated by PLC
parallel to calcineurin are required for calcineurin function.
In a recent model, PLC
was proposed to inhibit Egf receptor/Ras signaling via the activation of Gap1 by InsP4 (![]()
is also acting through calcineurin. The genetic evidence that we present indicates that calcineurin intersects with the Ras pathway at roughly the same point that PLC
does, and thus we propose a modified model for the function of PI signaling in Drosophila development (Fig 8). Additionally, the fact that calcineurin can be activated by any sustained Ca2+ flux suggests a mechanism by which other signaling pathways, such as GPCRs acting via PLCß, can modulate Egf receptor signaling.
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In conclusion, we have demonstrated that a dominant modifier screen can be used successfully to isolate mutations in genes involved in calcineurin function. The mutations in the calcineurin B gene that we isolated in the screen will help determine the roles of calcineurin in Drosophila development. In addition, we have obtained compelling genetic evidence that calcineurin negatively regulates the Egf receptor/Ras signaling pathway at the level of Gap1 and sprouty. Calcineurin may act directly by dephosphorylating one or more signaling components, or it may target a transcription factor and act indirectly through changes in gene expression. More work will be needed to elucidate the molecular mechanism, and the modifiers isolated in the canAact.gl screen should prove valuable in this endeavor. Furthermore, given the conservation of signal transduction between fruit flies and vertebrates, it is likely that the signaling network we have identified is employed in other organisms.
| ACKNOWLEDGMENTS |
|---|
We thank Trudi Schüpbach, Justin Thackeray, Mike Simon, Herman Meisner, and Mark Krasnow for generous gifts of fly stocks. We express our gratitude to Todd Laverty for polytene chromosome analyses, Amy Tang for help with sectioning eyes, Tom Serano for assistance with SEM, and Felix Karim and Laurie Lee for advice on modifier screens and mapping. We also thank Kate Beckingham, Eric Lai, Laurie Lee, and Paul Wes for comments on the manuscript. K.M.C.S. was supported in part by a Postdoctoral Research Fellowship from the Cancer Research Fund of the Damon Runyon-Walter Winchell Foundation and by a Young Investigator Award from the National Alliance for Research on Schizophrenic and Affective Disorders.
Manuscript received October 17, 2001; Accepted for publication February 11, 2002.
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