IDT. Quality oligos. Every time.

Kauer et al. APPENDIX
TABLE A1

List of all microsatellite loci
Population
Locus
Heterozygosity
Variance in repeat number
Mean repeat number
Adjusted recombination rate 
(x 10-8)1
Cyt. Location2
Africa x506493gt
0.81
5.46
10.73
0
1c
Africa X651868ca
0.79
9.19
9.90
0
1c
Africa x728937ca
0.74
2.26
10.80
0
1d
Africa x742605gt
0.69
4.76
10.08
0
1d
Africa X750934gt
0.90
17.54
12.99
0
1d
Africa x884191ga
0.77
3.55
12.03
0.05
1e
Africa x986182gt
0.72
9.17
7.88
0.03
1f
Africa 56G7-AC
0.25
0.96
10.35
0.09
2B
Africa 56G7-AT
0.70
3.83
10.86
0.09
2B
Africa x1481559gt
0.81
3.22
10.80
0.1
2b
Africa X1721159gt
0.80
6.87
11.11
0.21
2c
Africa X1883543gt
0.68
0.81
11.83
0.32
2d
Africa x2052732ca
0.80
2.06
10.02
0.54
2f
Africa DS01001
0.79
15.69
8.96
0.86
3A
Africa X2297267gt
0.75
6.86
9.12
0.86
3a
Africa 1296/1297
0.63
2.27
10.53
1.06
3b
Africa 56g7-ag-f
0.72
1.06
9.67
0.95
3B
Africa x2571651gt
0.91
18.22
13.02
1.06
3b
Africa 66-95-3
0.72
5.90
5.37
1.63
3c
Africa 95B7-AT
0.63
1.88
7.45
1.47
3c
Africa 95B7-TC
0.78
5.11
10.91
1.47
3c
Africa 95B7-TG
0.78
3.04
9.70
1.47
3c
Africa DS06335a
0.89
26.36
14.17
1.63
3C
Africa DS00036
0.75
7.08
9.74
2.37
4A
Africa DS00146
0.79
8.70
10.04
2.37
4A
Africa DS04440
0.79
24.62
9.17
1.63
6e
Africa 81C6
0.73
1.00
10.50
0.89
7d
Africa DS09021
0.87
14.17
11.74
1.63
8B
Africa Dm2004-TA
0.86
5.16
8.95
2.18
8d
Africa DS01391
0.63
8.66
10.31
2.12
9a
Africa DS01551
0.86
12.10
9.79
2.29
10d
Africa DS09020
0.90
24.97
7.94
2.09
15A
Africa DS00265a
0.73
3.18
12.18
1.61
16a
Africa DS00265b
0.72
2.78
4.97
1.79
16A
Africa 1397/1398
0.76
15.34
10.90
1.07
19e
Africa x21100995gt
0.52
0.65
9.85
0.89
19f
Africa x21147800gt
0.64
3.89
10.32
0.89
19f
Africa x21297264gt
0.87
11.13
13.64
0.89
19f
Africa X21300817ta
0.89
37.33
10.30
0.68
20a
Africa x21408452ta
0.77
1.55
8.10
0.48
20b
Africa Eno-CA
0.65
2.23
8.06
1.45
22A
Africa Eno-TA
0.45
1.01
7.64
1.45
22A
Africa Eno-TC
0.00
0.00
7.75
1.45
22A
Africa Z50409
0.58
4.43
7.11
1.59
22B
Africa Pkg-GT
0.68
17.73
10.00
1.85
23A
Africa Pkg-TA
0.84
2.27
7.58
1.85
23A
Africa Pkg-TC
0.74
6.47
9.55
1.85
23A
Africa DS01340
0.53
3.39
9.17
2.04
24A
Africa Dm0600-CA
0.64
5.24
9.47
2.08
24C
Africa Dm0600-TA
0.47
2.53
11.95
2.08
24C
Africa Dm0600-TC
0.88
14.94
8.79
2.08
24C
Africa ft-CA
0.72
6.34
7.04
2.12
24E
Africa ft-TA
0.18
0.09
7.10
2.12
24E
Africa ft-TC
0.88
16.06
10.29
2.12
24e
Africa Drogpdha
0.66
5.83
7.05
2.2
25f
Africa DS00168
0.31
2.09
8.91
2.2
26A
Africa Dm2337
0.85
21.96
14.15
2.2
27A
Africa Droninac
0.33
0.56
9.81
2.18
28A
Africa su.var
0.76
9.10
11.70
2.15
29A
Africa DS08088
0.86
23.85
11.64
2.14
29C
Africa Dm0332-TC
0.46
0.49
6.97
2.12
29F
Africa DS01054
0.13
4.18
7.07
2.11
30A
Africa DS03018
0.47
1.15
7.75
2.11
30A
Africa G410
0.85
50.69
9.82
1.58
33e
Africa Adh-TA
0.53
0.66
8.33
1.11
35B
Africa Adh-TC
0.56
6.94
8.81
1.11
35B
Africa Adh-TG
0.71
0.74
11.37
1.11
35B
Africa D6744
0.36
0.78
8.06
0.97
35e
Africa cact-TA
0.80
6.49
8.13
0.91
35F
Africa cact-TC
0.39
1.00
7.88
0.91
35f
Africa cact-TG
0.44
0.25
6.84
0.91
35F
Africa DS00762
0.28
2.58
6.89
0.43
37B
Africa DS09065/1
0.86
13.53
13.23
0.35
37f
Africa Dm0332-CA
0.31
1.45
9.02
0.19
38B
Africa Dm0332-TA
0.81
0.58
8.73
0.19
38B
Africa Cad-CA
0.65
5.34
11.07
0.11
38d
Africa Cad-GA
0.69
1.36
11.22
0.11
38D
Africa Cad-TA
0.66
1.76
9.83
0.11
38D
Africa DS07289
0.42
0.99
7.91
0
41e
Africa tor
0.43
6.27
12.60
0.04
43B
Africa tor-GT
0.78
3.21
10.57
0.04
43B
Africa tor-TA
0.63
3.21
9.01
0.04
43B
Africa tor-TC
0.42
0.50
7.47
0.04
43B
Africa D5915
0.70
29.74
10.75
0.27
44d
Africa Drogpad
0.84
19.48
9.08
0.72
47A
Africa Dmmp20
0.68
28.01
9.30
1.11
49f
Africa Dm0620
0.68
2.65
8.85
1.12
51e
Africa DS00541
0.63
1.19
10.03
1.07
52C
Africa Pkc53E-CA
0.62
2.17
7.34
0.95
53D
Africa Pkc53E-GA
0.87
5.85
11.20
0.95
53D
Africa Pkc53E-TA
0.38
0.94
6.87
0.95
53D
Africa DS00361c
0.74
6.40
7.04
0.84
54B
Africa DS00144
0.10
0.43
7.93
0.74
55A
Africa Ote-CA
0.87
5.71
10.93
0.74
55A
Africa Ote-GA
0.79
3.51
9.00
0.74
55A
Africa Ote-TA
0.50
0.31
7.09
0.74
55A
Africa Dpt-GT
0.59
2.31
8.05
0.63
55F
Africa Dpt-TA
0.86
4.75
6.82
0.63
55F
Africa Dpt-TC
0.05
0.55
8.98
0.63
55f
Africa Dm1639-CA
0.72
10.81
12.66
0.62
58B
Africa Dm1639-TA
0.63
0.72
8.35
0.62
58B
Africa Dm1639-TC
0.72
1.13
8.46
0.62
58B
Africa Z31849
0.22
3.08
9.56
0.62
58C
Africa G411
0.07
0.11
6.04
0.63
58d
Africa DS08011
0.80
13.82
8.41
0.64
59A
Africa 3L500820gt
0.80
8.61
7.75
0.34
61C
Africa AprtBZ
0.75
5.31
14.02
0.76
61f
Africa Mdr
0.78
15.61
12.53
2.45
64e
Africa 3L12139804gt
0.80
1.25
9.96
1.7
68f
Africa 3L13408501ca
0.87
10.59
11.58
1.36
70b
Africa 3L13844712ga
0.72
4.45
11.77
1.28
70c
Africa 3L14197261ta
0.68
7.54
10.26
1.22
70d
Africa 3L15290185ca
0.76
6.37
12.06
1.04
71b
Africa 3L15443860ca
0.74
3.62
11.21
0.94
71e
Africa 3L16575599gt
0.86
28.47
11.22
0.61
73c
Africa 3L17166925ca
0.85
10.35
11.00
0.47
74c
Africa 3L17067764gt
0.75
6.02
9.99
0.44
74d
Africa 3L17555891ct
0.80
5.33
10.14
0.42
74e
Africa 3L18033782ga
0.87
12.07
11.27
0.3
75c
Africa 3L18673367ga
0.90
7.38
13.34
0.28
75d
Africa 3L19131867ta
0.82
2.44
10.02
0.19
76b
Africa 3L19781432ct
0.74
4.05
13.10
0.13
76e
Africa 3L20028475ca
0.80
5.54
10.24
0.11
77a
Africa 3L21099506ca
0.77
14.57
8.70
0.02
78c
Africa 3L21309672gt
0.81
5.48
11.67
0.02
78d
Africa 3L21961365ca
0.65
13.78
10.31
0
79c
Africa 3L22168867ca
0.79
18.06
4.64
0
79d
Africa 3L22184535ga
0.54
0.32
10.65
0
79d
Africa 3L22333141gt
0.71
6.11
12.60
0
79e
Africa Antp-GT
0.02
0.03
7.96
0.12
84A
Africa Antp-TA
0.49
0.32
6.76
0.12
84A
Africa Antp-TC
0.17
0.21
10.60
0.12
84A
Africa AntpBZ
0.38
1.23
13.48
0.12
84A
non-Africa x506493gt
0.16
0.33
9.95
0
1c
non-Africa X651868ca
0.57
3.85
11.47
0
1c
non-Africa x728937ca
0.45
0.68
11.52
0
1d
non-Africa x742605gt
0.48
2.05
12.75
0
1d
non-Africa X750934gt
0.25
0.60
14.00
0
1d
non-Africa x884191ga
0.29
0.19
9.98
0.05
1e
non-Africa x986182gt
0.08
0.21
10.98
0.03
1f
non-Africa 56G7-AC
0.08
0.45
9.88
0.09
2B
non-Africa 56G7-AT
0.45
1.15
9.50
0.09
2B
non-Africa x1481559gt
0.18
0.35
11.78
0.1
2b
non-Africa X1721159gt
0.15
0.36
10.04
0.21
2c
non-Africa X1883543gt
0.39
0.86
11.71
0.32
2d
non-Africa x2052732ca
0.08
1.07
10.93
0.54
2f
non-Africa DS01001
0.40
0.20
9.02
0.86
3A
non-Africa X2297267gt
0.60
2.18
8.80
0.86
3a
non-Africa 1296/1297
0.09
0.16
10.94
1.06
3b
non-Africa 56g7-ag-f
0.11
0.08
9.55
0.95
3B
non-Africa x2571651gt
0.37
3.90
11.04
1.06
3b
non-Africa 66-95-3
0.14
0.63
5.72
1.63
3c
non-Africa 95B7-AT
0.46
1.02
8.26
1.47
3c
non-Africa 95B7-TC
0.48
0.73
10.19
1.47
3c
non-Africa 95B7-TG
0.47
7.27
9.36
1.47
3c
non-Africa DS06335a
0.71
4.52
14.47
1.63
3C
non-Africa DS00036
0.62
1.16
9.79
2.37
4A
non-Africa DS00146
0.30
0.20
10.05
2.37
4A
non-Africa DS04440
0.62
8.35
8.97
1.63
6e
non-Africa 81C6
0.61
0.81
10.38
0.89
7d
non-Africa DS09021
0.76
31.55
12.00
1.63
8B
non-Africa Dm2004-TA
0.52
1.03
8.56
2.18
8d
non-Africa DS01391
0.52
10.31
8.63
2.12
9a
non-Africa DS01551
0.72
3.52
9.76
2.29
10d
non-Africa DS09020
0.50
1.10
7.99
2.09
15A
non-Africa DS00265a
0.52
0.96
11.52
1.61
16a
non-Africa DS00265b
0.70
1.86
4.94
1.79
16A
non-Africa 1397/1398
0.50
1.96
12.77
1.07
19e
non-Africa x21100995gt
0.58
0.93
10.51
0.89
19f
non-Africa x21147800gt
0.28
1.04
12.67
0.89
19f
non-Africa x21297264gt
0.09
0.24
11.91
0.89
19f
non-Africa X21300817ta
0.40
0.74
9.99
0.68
20a
non-Africa x21408452ta
0.32
0.68
9.05
0.48
20b
non-Africa Eno-CA
0.57
2.95
8.84
1.45
22A
non-Africa Eno-TA
0.69
0.60
8.40
1.45
22A
non-Africa Eno-TC
0.19
0.80
7.78
1.45
22A
non-Africa Z50409
0.63
6.37
7.19
1.59
22B
non-Africa Pkg-GT
0.60
10.00
13.02
1.85
23A
non-Africa Pkg-TA
0.48
0.73
6.93
1.85
23A
non-Africa Pkg-TC
0.71
1.82
9.66
1.85
23A
non-Africa DS01340
0.60
1.61
9.20
2.04
24A
non-Africa Dm0600-CA
0.58
2.28
9.19
2.08
24C
non-Africa Dm0600-TA
0.58
0.60
11.26
2.08
24C
non-Africa Dm0600-TC
0.39
3.03
8.86
2.08
24C
non-Africa ft-CA
0.43
4.55
7.51
2.12
24E
non-Africa ft-TA
0.06
0.04
7.03
2.12
24E
non-Africa ft-TC
0.67
6.18
10.18
2.12
24e
non-Africa Drogpdha
0.84
8.17
7.32
2.2
25f
non-Africa DS00168
0.07
0.17
8.91
2.2
26A
non-Africa Dm2337
0.75
1.97
13.98
2.2
27A
non-Africa Droninac
0.44
0.28
9.83
2.18
28A
non-Africa su.var
0.76
14.62
11.85
2.15
29A
non-Africa DS08088
0.51
2.74
12.20
2.14
29C
non-Africa Dm0332-TC
0.32
0.26
6.47
2.12
29F
non-Africa DS01054
0.03
0.02
7.08
2.11
30A
non-Africa DS03018
0.51
0.61
7.73
2.11
30A
non-Africa G410
0.84
14.31
10.71
1.58
33e
non-Africa Adh-TA
0.60
0.49
8.20
1.11
35B
non-Africa Adh-TC
0.67
5.80
6.52
1.11
35B
non-Africa Adh-TG
0.12
0.07
11.54
1.11
35B
non-Africa D6744
0.40
0.20
8.09
0.97
35e
non-Africa cact-TA
0.53
0.68
8.86
0.91
35F
non-Africa cact-TC
0.21
0.17
6.52
0.91
35f
non-Africa cact-TG
0.53
0.31
6.45
0.91
35F
non-Africa DS00762
0.52
1.77
6.88
0.43
37B
non-Africa DS09065/1
0.54
5.85
12.27
0.35
37f
non-Africa Dm0332-CA
0.31
0.75
9.17
0.19
38B
non-Africa Dm0332-TA
0.64
0.21
8.72
0.19
38B
non-Africa Cad-CA
0.71
2.52
11.73
0.11
38d
non-Africa Cad-GA
0.40
1.06
10.08
0.11
38D
non-Africa Cad-TA
0.69
2.89
10.03
0.11
38D
non-Africa DS07289
0.47
0.34
7.93
0
41e
non-Africa tor
0.74
2.68
12.37
0.04
43B
non-Africa tor-GT
0.48
1.96
10.06
0.04
43B
non-Africa tor-TA
0.22
0.14
9.61
0.04
43B
non-Africa tor-TC
0.35
0.18
7.06
0.04
43B
non-Africa D5915
0.48
4.61
10.83
0.27
44d
non-Africa Drogpad
0.45
2.71
9.12
0.72
47A
non-Africa Dmmp20
0.52
2.65
9.67
1.11
49f
non-Africa Dm0620
0.65
0.62
8.90
1.12
51e
non-Africa DS00541
0.59
0.74
10.02
1.07
52C
non-Africa Pkc53E-CA
0.18
0.45
8.03
0.95
53D
non-Africa Pkc53E-GA
0.44
1.07
11.16
0.95
53D
non-Africa Pkc53E-TA
0.08
0.33
6.88
0.95
53D
non-Africa DS00361c
0.54
1.72
7.04
0.84
54B
non-Africa DS00144
0.00
0.00
7.93
0.74
55A
non-Africa Ote-CA
0.71
5.98
11.02
0.74
55A
non-Africa Ote-GA
0.46
0.93
9.78
0.74
55A
non-Africa Ote-TA
0.14
0.13
8.00
0.74
55A
non-Africa Dpt-GT
0.54
1.00
8.86
0.63
55F
non-Africa Dpt-TA
0.79
2.93
7.21
0.63
55F
non-Africa Dpt-TC
0.06
0.04
8.97
0.63
55f
non-Africa Dm1639-CA
0.51
7.26
10.63
0.62
58B
non-Africa Dm1639-TA
0.60
0.67
8.16
0.62
58B
non-Africa Dm1639-TC
0.63
1.18
8.85
0.62
58B
non-Africa Z31849
0.47
2.25
9.71
0.62
58C
non-Africa G411
0.41
0.24
6.04
0.63
58d
non-Africa DS08011
0.78
7.85
8.21
0.64
59A
non-Africa 3L500820gt
0.71
7.91
9.60
0.34
61C
non-Africa AprtBZ
0.66
2.09
14.00
0.76
61f
non-Africa Mdr
0.75
19.23
11.84
2.45
64e
non-Africa 3L12139804gt
0.67
1.01
11.17
1.7
68f
non-Africa 3L13408501ca
0.70
2.61
12.66
1.36
70b
non-Africa 3L13844712ga
0.42
0.53
13.19
1.28
70c
non-Africa 3L14197261ta
0.65
1.78
11.66
1.22
70d
non-Africa 3L15290185ca
0.45
0.57
12.28
1.04
71b
non-Africa 3L15443860ca
0.53
2.10
9.04
0.94
71e
non-Africa 3L16575599gt
0.70
2.13
11.33
0.61
73c
non-Africa 3L17166925ca
0.66
1.10
10.23
0.47
74c
non-Africa 3L17067764gt
0.75
9.20
12.48
0.44
74d
non-Africa 3L17555891ct
0.81
4.59
12.39
0.42
74e
non-Africa 3L18033782ga
0.80
14.50
13.23
0.3
75c
non-Africa 3L18673367ga
0.81
6.51
14.25
0.28
75d
non-Africa 3L19131867ta
0.58
2.04
8.80
0.19
76b
non-Africa 3L19781432ct
0.81
4.07
14.10
0.13
76e
non-Africa 3L20028475ca
0.22
0.77
10.50
0.11
77a
non-Africa 3L21099506ca
0.75
9.51
8.31
0.02
78c
non-Africa 3L21309672gt
0.57
0.81
12.39
0.02
78d
non-Africa 3L21961365ca
0.76
16.02
10.02
0
79c
non-Africa 3L22168867ca
0.80
17.21
6.47
0
79d
non-Africa 3L22184535ga
0.26
0.14
11.04
0
79d
non-Africa 3L22333141gt
0.78
6.75
13.91
0
79e
non-Africa Antp-GT
0.01
0.01
7.98
0.12
84A
non-Africa Antp-TA
0.42
0.23
7.25
0.12
84A
non-Africa Antp-TC
0.24
0.13
10.63
0.12
84A
non-Africa AntpBZ
0.46
0.60
13.50
0.12
84A

1 X-chromosomal loci are multiplied by 0.66, autosomal loci are multiplied by 0.5. Units of recombination rate are recombination events x bp-1 x generation-1.

2 1-20: X-chromosome, 21-60: 2nd chromosome, 61-100: 3rd chromosome.