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Female Meiosis Drives Karyotypic Evolution in Mammals
Fernando Pardo-Manuel de Villenaa and Carmen Sapienzaba Department of Genetics, University of North Carolina, Chapel Hill, North Carolina 27599-7264
b Fels Institute for Cancer Research and Molecular Biology and Department of Pathology and Laboratory Medicine, Temple University School of Medicine, Philadelphia, Pennsylvania 19140
Corresponding author: Carmen Sapienza, Fels Institute for Cancer Research and Molecular Biology, Temple University Medical School, 3307 N. Broad St., Philadelphia, PA 19140., sapienza{at}unix.temple.edu (E-mail)
Communicating editor: S. HENIKOFF
| ABSTRACT |
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Speciation is often accompanied by changes in chromosomal number or form even though such changes significantly reduce the fertility of hybrid intermediates. We have addressed this evolutionary paradox by expanding the principle that nonrandom segregation of chromosomes takes place whenever human or mouse females are heterozygous carriers of Robertsonian translocations, a common form of chromosome rearrangement in mammals. Our analysis of 1170 mammalian karyotypes provides strong evidence that karyotypic evolution is driven by nonrandom segregation during female meiosis. The pertinent variable in this form of meiotic drive is the presence of differing numbers of centromeres on paired homologous chromosomes. This situation is encountered in all heterozygous carriers of Robertsonian translocations. Whenever paired chromosomes have different numbers of centromeres, the inherent asymmetry of female meiosis and the polarity of the meiotic spindle dictate that the partner with the greater number of centromeres will attach preferentially to the pole that is most efficient at capturing centromeres. This mechanism explains how chromosomal variants become fixed in populations, as well as why closely related species often appear to have evolved by directional adjustment of the karyotype toward or away from a particular chromosome form. If differences in the ability of particular DNA sequences or chromosomal regions to function as centromeres are also considered, nonrandom segregation is likely to affect karyotype evolution across a very broad phylogenetic range.
THERE is broad agreement that the establishment of a new species is often accompanied by changes in chromosome number or morphology (![]()
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"Meiotic drive" is a term that is most often associated with systems of male gamete dysfunction, such as Segregation distorter in Drosophila and the t-haplotype in the mouse (reviewed in ![]()
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If meiotic drive is to occur via nonrandom segregation of chromosomes, three conditions must be fulfilled (reviewed in ![]()
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All three conditions are apparently fulfilled during female meiosis in many phylogenetic groups when unusual chromosome morphology, chromosome rearrangements, or other karyotypic abnormalities are present (reviewed in ![]()
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| The unequal centromere number rule |
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A common feature of most of the above examples is that nonrandom segregation is observed when different numbers of centromeres or structures that can act as centromeres ["neocentromeres" (![]()
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The data in Fig 1 include only balanced offspring (so that the segregation bias cannot be explained by postfertilization selection against aneuploid offspring) but unbalanced products of meiosis also adhere to the unequal centromere number rule (Fig 2). In the case of nonrandom segregation of the unpaired X chromosome in XO female mice (Fig 2A; ![]()
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In the chicken, the polar body side of the spindle is the side to which the greater number of centromeres is segregated preferentially, regardless of whether this leads to a balanced (Fig 1) or an unbalanced (Fig 2B) meiotic product. The side of the metaphase with the larger number of centromeres is segregated preferentially to the polar body, regardless of which chromosome is involved in creating the aneuploidy or whether the disparity in centromere number on opposite sides of the metaphase is one vs. two or zero vs. three (![]()
The observed characteristics of nonrandom segregation are consistent on three levels: (1) Nonrandom segregation is observed for many different examples of the same type of chromosome abnormality; (2) the direction of nonrandom segregation of each type of abnormality is constant, within the species; and (3) the direction of nonrandom segregation observed for different types of abnormalities can be predicted on the basis of the unequal centromere number rule.
The consistency with which segregation bias is associated with differences in paired centromere number indicates that meiotic spindle polarity reflects differences in the ability of the two poles to "capture" centromeres. This point has been raised by a number of investigators in discussions of nonrandom segregation (![]()
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We noted that the direction of nonrandom segregation in human and mouse is in the same direction as the major chromosome form in the karyotype of each species. The mouse karyotype contains exclusively acrocentric chromosomes while the human karyotype contains 18 metacentric of submetacentric chromosomes and only five acrocentric chromosomes. If meiotic spindle polarity is a general feature of female meiosis, then nonrandom segregation is predicted to play a major role in karyotypic evolution. Whenever a chromosomal variant occurs (and Robertsonian translocations are the most common chromosome rearrangement in many mammals, including humans, where they occur with a frequency of 0.1% of meioses; ![]()
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The class Mammalia provides a unique opportunity to test this hypothesis because karyotypic evolution in mammals is thought to occur principally via Robertsonian translocation intermediates (![]()
| MATERIALS AND METHODS |
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Definition of chromosome form:
The diploid number of chromosomes, the number of acrocentric chromosomes, and the number of bi-armed (metacentric or submetacentric) chromosomes in each species' karyotype was taken from published reports. These data are summarized in Supplemental Appendix 1 and the references from which the data have been compiled are given in Supplemental Appendix 2 (http://www.genetics.org/supplemental). Only autosomes were used in the analysis to avoid introducing bias due to morphological differences in the sex chromosomes and the existence of XY1Y2 sex determination systems in some species (e.g., ![]()
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Selection of species:
To ensure fair representation of species from each order, species were selected in approximate proportion to the "species richness" (![]()
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Statistical analysis:
The null hypothesis of random segregation of homologous chromosomes was tested for data summarized in Fig 1 and Fig 2 using the
2 test statistic. To determine whether the distribution of acrocentric chromosomes among the karyotypes of mammalian species was random, the binomial distribution was used to calculate the expected distribution of the 1170 species as a function of percentage of acrocentric autosomes in the karyotype. Expected values of percentage of acrocentric chromosomes were calculated for 18 equal intervals and the distribution curve (see Fig 5) was fit to the expected values by eye. The number of intervals used to plot the observed values of percentage of acrocentric autosomes in the karyotype (nine in Fig 5 and three in Fig 6) was chosen to accommodate the number of independent variables (haploid number of autosomes) and the number of species being compared within each group and to allow graphical representation of the distribution such that the expected mean of the distribution would be contained in a single interval.
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| RESULTS |
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General characteristics of the sample of mammalian karyotypes:
The 1170 mammalian species (2025% of extant mammalian species) that we examined (see MATERIALS AND METHODS) have a mean diploid number of 43.3, ranging from 2n = 6 to 102 (Fig 4A). Among the entire collection of 48,375 autosomes, bi-armed and acrocentric chromosomes are nearly equally represented (49.4% are bi-armed and 50.6% are acrocentric). The distribution of species with respect to diploid number (Fig 4A) and fundamental number (diploid number of chromosome arms, Fig 4B) also indicates that there is no strong preference for bi-armed or acrocentric (uni-armed) chromosomes, overall.
Distribution of species as a function of chromosome form:
If acrocentric and bi-armed chromosomes are distributed randomly among the karyotypes of all species examined, then the distribution of species, as a function of the fraction of acrocentric chromosomes in the karyotype, is expected to follow a binomial distribution, with a mean of 50.6% acrocentric chromosomes. If, on the other hand, karyotypic evolution is driven by nonrandom segregation of either bi-armed or acrocentric chromosomes to the ovum, then the majority of species are predicted to have karyotypes that contain predominantly bi-armed chromosomes or predominantly acrocentric chromosomes and few species are predicted to cluster near the population mean. The observed distribution of mammalian species, as a function of the fraction of acrocentric chromosomes in the karyotype, is shown in Fig 5. In contrast to the expectations for a binomial distribution (dashed line in Fig 5), >50% of the species have karyotypes that are in the two extremes of the distribution (<11.1% acrocentric or >88.9% acrocentric) while <14% of species fall in the three central intervals of the distribution (33.466.7% acrocentric).
Importantly, the clustering of species in the extremes and relative scarcity in the center of the distribution is not a result that is driven by any single phylogenetic group. Fig 6 shows a phylogenetic tree (![]()
Overall, we may reject the hypothesis that there is a random distribution of chromosome morphology among mammalian species. On the other hand the data in Fig 5 and Fig 6 are consistent with the predictions of the nonrandom segregation hypothesis.
| DISCUSSION |
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Factors that may explain mammalian karyotypic evolution:
Our analysis indicates that the distribution of acrocentric and bi-armed (metacentric and submetacentric) chromosomes among the karyotypes of mammalian species is not random. The karyotype of individual species appears to be driven toward the accumulation of either acrocentric chromosomes or bi-armed chromosomes (Fig 5). This result cannot be explained by a major role for either genetic drift or inbreeding in the evolution of mammalian karyotypes. Both of these mechanisms predict a random distribution of chromosome morphology among species as the result of chance fixation of chromosome variants in small, isolated populations. However, nonrandom segregation of one chromosome morphology at the expense of the other (meiotic drive) or adaptive selection of one chromosome morphology over the other can explain the observed distribution of acrocentric and bi-armed chromosomes among mammalian species.
Direct evidence in support of the nonrandom segregation hypothesis has been obtained from chromosomally hybrid individuals (carrying an odd number of chromosomes and active centromeres) in mouse and human (![]()
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In contrast, there is little experimental support for the hypothesis that a particular chromosome morphology provides a selective advantage within any particular lineage. We are unaware of any mechanism by which chromosome morphology has been demonstrated to provide an adaptive advantage. Even the proposed effect of chromosome morphology on recombination (![]()
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It is also difficult to rationalize the adaptive value of a particular chromosome morphology in a particular lineage with the fact that an excess of species with both extremes of karyotype (from predominantly acrocentric chromosomes to predominantly bi-armed chromosomes) are found within mammalian orders (Fig 6), within some families, i.e., Cricetidae (24/10/63; numbers in parentheses represent the number of species in each of the three intervals shown in Fig 6), Arvicolidae (5/1/19), Canidae (3/2/9), Vespertilionidae (18/11/38), Geomydae (4/1/3), and even within some genera, i.e., Muntiacus (4/0/2), Lepilemur (4/0/2), Reithrodontomys (4/0/6), Gerbillus (5/0/4) (see Supplemental Appendix 1 at http://www.genetics.org/supplemental for documentation).
Given the theoretical and experimental difficulties in explaining these observations by adaptive selection, we argue that nonrandom segregation stands as the only one of the four mechanisms for which there is experimental evidence as well as a mechanistic explanation for the role of chromosome morphology in the evolution of mammalian karyotypes. In this regard, it is important to remember that although we used the nonrandom segregation hypothesis to predict the distribution of chromosome morphology among species, the mechanism of nonrandom segregation is not based on differences in chromosome morphology per se. Nonrandom segregation results from functional differences between the meiotic spindle poles in their ability to capture centromeres and the fact that different numbers of centromeres are found on paired chromosomes whenever Robertsonian translocations (bi-armed chromosomes with a single active centromere) are paired with acrocentric homologues (two uni-armed chromosomes with a total of two centromeres). Because nonrandom segregation in heterozygous carriers of Robertsonian translocations is based on the unequal centromere number rule, we were able to simplify our analysis (Fig 5; Supplemental Appendix 1 at http://www.genetics.org/supplemental) to consideration of only uni-armed and bi-armed chromosomes. We acknowledge that some chromosome rearrangements that can change chromosome morphology (pericentric inversions, centromere "switches," etc.) are not predicted to result in nonrandom segregation and will appear as background noise in the analysis. On the other hand, other types of rearrangements that change the diploid number by one but need not change chromosome morphology, such as tandem fusions, should also be subject to nonrandom segregation (![]()
On what phylogenetic and time scale does reversal of spindle polarity occur?
The simultaneous presence of both extremes of karyotype within orders, families, and genera and even within different races of the same species indicates that the mechanism leading to the accumulation of one chromosome morphology within a species has been present throughout mammalian evolution and that reversal of the direction of nonrandom segregation has occurred many times. In fact, data gathered from studies of wild populations of M. musculus indicate that nearly complete reversal of the prevalent chromosome form can occur both within a species as well as rapidly, in evolutionary time. Populations that have been separated by as few as 500 years [on the island of Madeira (![]()
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These comparative studies are also supported by more direct experimental evidence from both field studies and laboratory studies that indicate that reversal of spindle polarity has occurred within races of the same species. Some wild populations of M. musculus show transmission ratio distortion in favor of bi-armed (Robertsonian) chromosomes rather than acrocentrics (![]()
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Such "reversals" of spindle polarity within phylogenetic groups can explain why closely related species sometimes have dramatically different karyotypes (Supplemental Appendix 1 at http://www.genetics.org/supplemental) but it can also explain why karyotype evolution appears to have taken place by directional adjustment [karyotype orthoselection (![]()
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General evolutionary implications of nonrandom segregation:
Although karyotypic changes have occurred frequently during evolution and are associated with speciation, the fixation of such changes has been assumed to occur by chance, in small populations, or through natural selection operating at the level of organismal phenotype. Our analysis indicates that nonrandom segregation of chromosomes, as a general facet of female meiosis, represents an important selective force in the evolution of genomes. This mechanism has great potential to affect the number of linkage groups within a species.
While most nucleotide sequence diversity appears to be generated in the male germline (![]()
Although the evidence on which this discussion is based has been derived from mammalian species, the fundamental asymmetry of female meiosis and functional asymmetry of the meiotic spindle is likely to be nearly universal. Therefore, nonrandom segregation based on differences in centromere number, differences in the ability of particular regions of chromatin to function as centromeres (![]()
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| ACKNOWLEDGMENTS |
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We are grateful to Drs. Dale Haines, Keith Latham, and Ken Morgan for critical comments on the manuscript and to the National Institutes of Health (R01HD34508 and R01GM62537 to C.S.), the UNC Chancellor Fund and the Howard Hughes Medical Institute (F.P.-M.V.) for support.
Manuscript received July 13, 2001; Accepted for publication August 29, 2001.
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