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Interallelic Complementation at the Drosophila melanogaster gastrulation defective Locus Defines Discrete Functional Domains of the Protein
Gregory Ponomareffa, Heidi Giordanoc, Yvonne DeLottob, and Robert DeLottoba Cornell Graduate School of Medicine, New York, New York 10021,
b Department of Genetics, University of Copenhagen, Copenhagen K, Denmark
c Tularik, South San Francisco, California 94080
Corresponding author: Robert DeLotto, Department of Genetics, University of Copenhagen, Copenhagen K, Denmark., rdelotto{at}biobase.dk (E-mail)
Communicating editor: A. J. LOPEZ
| ABSTRACT |
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The gastrulation defective (gd) locus encodes a novel serine protease that is involved in specifying the dorsal-ventral axis during embryonic development. Mutant alleles of gd have been classified into three complementation groups, two of which exhibit strong interallelic (intragenic) complementation. To understand the molecular basis of this interallelic complementation, we examined the complementation behavior of additional mutant alleles and sequenced alleles in all complementation groups. The data suggest that there are two discrete functional domains of Gd. A two-domain model of Gd suggesting that it is structurally similar to mammalian complement factors C2 and B has been previously proposed. To test this model we performed SP6 RNA microinjection to assay for activities associated with various domains of Gd. The microinjection data are consistent with the complement factor C2/B-like model. Site-directed mutagenesis suggests that Gd functions as a serine protease. An allele-specific interaction between an autoactivating form of Snake (Snk) and a gd allele altered in the protease domain suggests that Gd directly activates Snk in a protease activation cascade. We propose a model in which Gd is expressed during late oogenesis and bound within the perivitelline space but only becomes catalytically active during embryogenesis.
DORSAL-VENTRAL polarity of the Drosophila embryo is established during embryogenesis by the interpretation of positional information that is placed in the egg during oogenesis. Consequently, the process of specifying dorsal-ventral cell fate can be viewed as occurring in two distinct phases: an early one of producing a stable asymmetric cue in the mature egg and a later one involving interpretation of that positional cue at the syncytial blastoderm stage. Both phases of this process rely extensively upon signal transduction mechanisms (![]()
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homolog, and torpedo, the Drosophila epidermal growth factor receptor (![]()
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The second phase, that of interpretation of the cue during embryogenesis, involves another signal transduction pathway in which a signal originates within the perivitelline space (PVS) of the embryo (![]()
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An outstanding question is how the positional information laid down in the egg is converted into the ventrally restricted signal within the PVS after fertilization (reviewed by ![]()
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The molecular cloning of gd showed it to encode a protein with homology to the serine proteinase superfamily with, however, several structural features that are unusual for members of that superfamily (![]()
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gd, a genetically complex locus at cytological location 11A, was first described in a genetic screen for maternal effect genes affecting embryonic development (![]()
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The structural model for Gd suggests that it is similar to the mammalian complement factors C2 and B, two unusual serine proteases involved in the classical and alternative pathways of activation of the complement cascade (![]()
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To understand the basis of the interallelic complementation at gd, we extended the complementation analysis to more recently isolated gd alleles and determined the molecular lesions associated with alleles in all complementation groups. To test the C2/B structural model of Gd, we used an SP6 RNA microinjection assay to assay for activities of discrete domains of Gd. Our data support processing of Gd in a manner consistent with the complement C2/B-like model. An allele-specific interaction using RNA microinjection is consistent with biochemical data indicating that Gd directly activates Snk in a proteolytic cascade. Finally, we propose a biological model in which an inactive form of Gd is bound to a membrane within the PVS late during oogenesis but only becomes activated later at syncytial blastoderm stage. Such a model can account for the earlier-starting ts period described for gd as well as accommodate a direct role of Gd in activating the Snk zymogen in the protease cascade.
| MATERIALS AND METHODS |
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Fly strains used:
Wild-type strains were Oregon-R. The genotypes and sources of the alleles are as follows. gd1 v24/FM3, gd2 v/FM3, gd3 v/FM3, gd4 v/FM3, gd5 v/FM3, gd6 v/FM3, gd7 v/FM3, and gd190/FM7, l(1) TW9 were from the Tübingen stock collection. gdn27 y/FM7, gdp18 y/FM7, gd9 v/FM3, and gd10 v/FM3 were provided by K. Konrad. gd alleles prefixed by V, T, and L, marked with y w P[w+FRT], and balanced over FM7c were isolated and kindly provided by T. Schüpbach. Df(1)KA10 sn3 m/FM7c was from the Bloomington stock collection.
Cuticle preparations and complementation analysis:
The collection of embryos, dechorionation of embryos, and preparation of cuticles were performed as described (![]()
rhomboid in situ hybridization of Drosophila embryos:
In situ hybridizations were performed as described (![]()
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Cloning of the gd mutant alleles:
Genomic DNA was prepared as follows: 50100 males of the appropriate stock were homogenized in TE and phenol (pH 8) 1:1. Nucleic acids were isopropanol precipitated, dried, and resuspended in 50100 ml of TE. DNA (0.5 ml) was added to a 25-ml PCR reaction with the 5' gd genomic and 3' gd genomic flanking primers listed in Table 1. After PCR, the fragments were digested with EcoRI and BglII restriction enzymes, gel purified, and cloned into pGEM3. For the generation of cDNA clones from wild type and the gd mutant alleles, 0- to 2-hr embryos or homozygous females were homogenized in a Dounce with 0.5 ml of 4 M guanidinium isothiocyanate, 5 mM dithiothreitol, and 0.4 ml acid phenol. After two acid phenol/chloroform extractions and one chloroform extraction, nucleic acids were precipitated and poly(A)+ RNA was purified as described in SAMBROOK (1989). RNA (3 mg) was used in an RT-PCR reaction (as described in ![]()
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gd domain constructs:
gd
ne was made by fusing the signal peptide sequence of Ea to the vWF and serine protease domains of gd as described in HIGUCHI (1990). The outside primers were 5' easter BglII and 3' gd genomic. The inside primers were 5' easter-gd cat and 3' gd cat-easter. The starting templates were ea cDNA (pGEM3) and gdcD7 (![]()
ne, respectively. The primers used in the reverse PCR were gd seq7 and gd3' pro-enz and gd seq7 and 3' gdvWFe, respectively. The gd propolypeptide PCR product was cut with NotI and self-ligated, and the gd vWF domain PCR product was cut with EcoRI and self-ligated.
mRNA microinjection of transcripts into Drosophila embryos:
The mRNA transcripts were synthesized and microinjections performed as previously described (![]()
| RESULTS |
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Analysis of the phenotypic strength of gd alleles:
Screens for maternal effect mutations in various laboratories have generated new alleles of gd (see MATERIALS AND METHODS). We wished to characterize the phenotypic strength of these alleles using the same criteria used in earlier studies (![]()
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Interallelic complementation analysis of gd alleles:
Previous work revealed the existence of three groups of alleles at the gd locus (![]()
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Molecular alterations associated with gd mutant alleles:
To determine the nature of the changes in mutant alleles of gd, both genomic DNA and cDNA were isolated from each of 20 mutant alleles and subcloned. The nucleotide sequence of both the genomic DNA and cDNA was determined and these results are summarized in Table 4. Most alleles revealed deviations from the wild-type nucleic acid sequence that could be correlated with the mutant phenotype. gd190, a weak hypomorphic allele, has a single base change in the second intron, which alters splicing site usage and results in the generation of alternatively spliced transcripts at intron 2 (data not shown). For the alleles gd1, gd5, and gdp18, which are hypomorphic or weakly hypomorphic, no nucleotide changes were detected within either the protein coding sequences or within the introns. The positions of the observed changes relative to the protein structure are summarized in Fig 1. Noncomplementing alleles include lesions mapping throughout the protein coding region and, with the exception of gd7, they contain either a premature stop codon or deletion of part of a coding region. Only gd7 is predicted to generate a protein with single amino acid substitution. The lesions in the alleles gdTN124, gd2, gdLu119, gd3, and gdLQ4, members of the gd2 complementation group, are clustered within the proenzyme polypeptide after the signal peptide sequence and amino proximal to R136 and K137, which in the complement factor C2/B model correspond to the activation cleavage site. All of these lesions result in single amino acid changes within the predicted propolypeptide domain of Gd. The gd10 complementation group comprising gd6, gd10, and gdVO27 has lesions resulting in single amino acid changes located in close proximity to S468, the predicted active site serine of Gd. The proximity of these lesions to S468 suggests that they could affect Gd function by compromising proteolytic activity of the catalytic chain. Thus alterations in gd2 group members map to the presumptive proenzyme polypeptide of the C2/B model and those within the gd10 group map to the catalytic chain.
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Site-directed mutagenesis of gastrulation defective:
To test whether amino acid residues critical to serine protease catalysis are required for biological activity of Gd, we altered specific amino acid residues within the coding region of the molecule and used SP6 RNA microinjection to assay for changes in phenotypic rescue. Embryos from gd9/gd9 females are completely dorsalized (Table 5). As previously reported, injection of wild-type gdcD7 RNA into embryos from gd9/gd9 females locally ventralizes and generates open ventral denticles (![]()
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Analysis of functional domains proposed by the complement factor C2/B model:
If the complement factor C2/B model is correct, a cleavage between R136 and K137 should produce two polypeptides, an amino-terminally derived propolypeptide and a carboxy-terminally derived catalytic chain. In C2 and B, a domain directly following the cleavage site contains a vonWillebrand factor type A repeat motif, which functions as a binding site for upstream activators. To test the C2/B model, we generated SP6 RNA expressing the full-length Gd protein (wild type), the presumptive catalytic chain (gd
ne), the presumptive proenzyme polypeptide (gdpro), or a polypeptide comprising the vonWillebrand factor type A homology (gdvWF). The constructs are illustrated in Fig 2. RNA was microinjected into embryos from various gd allelic backgrounds and phenotypic rescue was scored. The results are summarized in Table 6.
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Embryos from amorphic gd9/gd9, gd2/gd2, and gd10/gd10 females are completely dorsalized and exhibit no filzkorper (see Fig 3A). When wild-type gd RNA is microinjected at >50 µg/ml concentration, the resulting embryos are partially ventralized and exhibit split ventral denticles near the site of injection (Fig 3B). When gd
ne RNA was microinjected into embryos from either gd9/gd9 or gd2/gd2 females, no change in dorsal-ventral cell fate was observed and the embryos remained dorsalized. However, when gd
ne RNA was injected into gd10/gd10 embryos, 54% of the embryos exhibited either filzkorper or filzkorper and ventral denticles and the gastrulation pattern exhibited polarity. In many embryos the overall cuticular pattern was very close to wild type (see Fig 3C). gd10 has a lesion in the presumptive catalytic chain and this result suggests that providing this fragment of Gd as a separate polypeptide can rescue lesions in the catalytic chain.
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When gdpro was injected into embryos from either gd2/gd2 or gd10/gd10 females, no rescue of the dorsalized phenotype was observed. Since we might have expected that gdpro would rescue embryos from gd2/gd2 females, we tested for activity of gdpro in wild-type embryos. When gdpro was injected into wild-type embryos, none of the embryos hatched and all of the embryos were partially dorsalized, revealing a dominant negative effect of this polypeptide (see Table 6). This suggests that, while gdpro cannot rescue lesions within the proenzyme polypeptide region, nevertheless, it can affect the patterning system in wild-type embryos. This may occur by binding and competing with some component of the patterning system to downregulate the ventralizing signal. To test whether the activity of full-length Gd could be reconstituted when both the propolypeptide and catalytic chain are provided in trans, gd
ne and gdpro were microinjected simultaneously into gd9/gd9 embryos. In these injections no phenotypic rescue was observed, suggesting that they cannot be supplied as two separate polypeptides to rescue gd9.
To test the role of the von Willebrand type A motif domain, gdvWF was microinjected into wild-type embryos. No embryos hatched and all of the embryos were to some extent dorsalized, indicating a dominant negative effect of the vonWillebrand factor type A homology domain. To determine how gdvWF alters the Dorsal gradient, we microinjected gdvWF RNA into wild-type embryos and examined the expression of rhomboid (rho), a marker for the slope and position of the Dorsal gradient, using in situ hybridization (Fig 4). In wild-type embryos rho is expressed bilaterally as two stripes 68 cells wide in a region corresponding to ventral neurogenic ectoderm (Fig 4A; ![]()
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Allele-specific interaction with an autoactivating form of Snake:
To determine whether Gd directly activates the zymogen form of Snk, we tested for an allele-specific interaction between Gd and Snk. We have previously described a novel form of Snk called XaSnake, which has been mutated in its activation peptide region in such a fashion that the activation peptide sequence resembles its own substrate specificity (![]()
ne (![]()
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| DISCUSSION |
|---|
The data presented here suggest an explanation for the interallelic complementation observed within the gd2 and the gd10 complementation groups. This interpretation is also consistent with the complement factor C2/B-like structural model. This C2/B model proposes that Gd, in the process of becoming activated, is cleaved into two separate polypeptide chains. Since all mutations in alleles of the gd2 group map to the presumptive proenzyme polypeptide, these alterations are expected to specifically alter the activity of the propolypeptide chain. In most serine proteases, this polypeptide is involved in regulating the activity of the catalytic chain by modulating interactions with cofactors and other components of activation complexes in protease activation cascades. The alleles comprising the gd10 complementation group have lesions in close proximity to the putative active site serine residue, predicting that they will disrupt the activity of the catalytic chain. Grouping of the alterations to these two regions of Gd would suggest that each part of the Gd protein has an independent biochemical activity.
Whereas interallelic complementation is often due to dimerization or multimerization of a protein, we do not favor this interpretation to explain the interallelic complementation observed at the gd locus. First, we have looked for dimerization of Gd using recombinant forms of the protein expressed using the baculovirus system and have found no evidence of either covalent or noncovalent dimers to date (M. DISSING and R. DELOTTO, unpublished results). Second, if proteolytic cleavage at the arginine-lysine pair is part of the normal activation mechanism, then two separate polypeptides would be generated. Complementation would then arise by each allele providing a functional polypeptide consisting of either the catalytic or propolypeptide chain. These two polypeptides appear to have independent biochemical functions and might function sequentially. Alternatively, they may be involved in formation of a larger multiprotein activation complex, something for which there is strong precedent among the coagulation and complement proteases (![]()
The genetic data indicate that functions mapping to each putative polypeptide chain can in some cases be provided in trans to restore normal function to the system. Microinjection of gd
ne into embryos from gd10 females restores the dorsal-ventral pattern with correct polarity with respect to the asymmetry of the egg. This indicates that the function of the carboxy-terminal catalytic chain may be provided as late as stage 2 of embryonic development. Microinjection of the propolypeptide into embryos from gd2/gd2 females did not result in rescue. This may be due to the inability of gdpro to displace a nonfunctional form of the Gd propolypeptide from an activation complex within the PVS. Transplantation experiments with perivitelline fluid revealed activities for Snk, Ea, and Spz, although they failed to find Gd activity (![]()
The allele-specific interaction between gd10 and XaSnake is consistent with Gd directly activating the Snk zymogen in a protease cascade. When injected into embryos from gd9/gd9 females, the catalytic chain of Gd does not rescue or exhibit a dominant lateralizing or ventralizing effect as do analogous constructs for Snk (snk
Ne) and Ea (ea
n; ![]()
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A role of the propolypeptide in the spatial regulation of Gd activity is supported by the fact that microinjection of gd
ne into the posterior pole of an embryo from a gd10/gd10 female results in rescue that is uniform along the anterior-posterior axis of the embryo. This contrasts with injection of wild-type gd RNA, which produces phenotypic rescue that is greater near the site of injection and less extreme away from the site of injection. The result of injection of gd
ne into embryos from gd10/gd10 females suggests that the Gd catalytic chain is capable of freely diffusing within the PVS, while full-length Gd is not. This would argue for a localizing or binding function for the Gd propolypeptide.
A model for how Gd functions that fits the ts period data and the genetic and molecular data is as follows. In this model the two separable functions, that of the propolypeptide chain and that of the catalytic chain, are required at two distinct times. Gd protein would be expressed from maternal mRNA late during oogenesis, secreted, and localized to the plasma membrane surface within the PVS via binding sites within the proenzyme polypeptide. Gd is uniformly distributed relative to the dorsal-ventral axis. It remains bound to the plasma membrane and remains inactive until the syncytial blastoderm stage. At this time, Gd becomes autocatalytically active only on the ventral side and initiates a proteolytic cascade resulting in the ventrally restricted production of a processed form of Spaetzle. This "localization during oogenesis/activation during embryogenesis" model explains the ability of Gd to restore ventrolateral pattern elements as late as stage 2 of embryogenesis by microinjection of RNA and its failure to normalize the pattern in embryos from gd9/gd9 females. This would be due to the failure to establish the normal distribution of bound Gd within the PVS during embryogenesis because of the nonuniform secretion of Gd into the PVS. Aspects of this model might be tested by generating a heat-shock-inducible form of Gd and a P-element-mediated transformed line.
Gd occupies a pivotal role in the process of specifying the dorsal-ventral axis of the embryo. Our data are consistent with Gd directly activating Snk and therefore suggest that Gd is the earliest acting of the germ-line-derived proteases in the PVS. Gd appears to be a molecule intimately involved in the interpretation of the ventral prepattern of the egg (R. DELOTTO, unpublished results). Biochemical data from coexpression experiments indicate that Gd activates Snk and triggers a proteolytic cascade comprising Snk, Ea, and Spz and in the process Gd undergoes rather complex proteolytic processing (![]()
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| ACKNOWLEDGMENTS |
|---|
We thank Boaz Rosenblat for assistance with the DNA sequencing, Marianne Dissing for helpful discussions, Ken Konrad and Anthony Mahowald for providing stocks and information in advance of publication, Trudi Schüpbach for providing stocks, and Gerd Jurgens for helpful discussions. Funding for this work was provided by the U.S. National Science Foundation, the Danish Cancer Fund, the Novo Nordisk Fund, the Vera and Karl Johan Michaelsens Legacy, and the Danish Natural Sciences Research Councils.
Manuscript received February 28, 2001; Accepted for publication July 11, 2001.
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