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A Role for the Swe1 Checkpoint Kinase During Filamentous Growth of Saccharomyces cerevisiae
Roberto La Valle1,a and Curt Wittenbergaa Departments of Molecular Biology and Cell Biology, The Scripps Research Institute, La Jolla, California 92037
Corresponding author: Curt Wittenberg, Departments of Molecular Biology and Cell Biology, The Scripps Research Institute, 10550 North Torrey Pines Rd., La Jolla, CA 92037., curtw{at}scripps.edu (E-mail)
Communicating editor: S. SANDMEYER
| ABSTRACT |
|---|
In this study we show that inactivation of Hsl1 or Hsl7, negative regulators of the Swe1 kinase, enhances the invasive behavior of haploid and diploid cells. The enhancement of filamentous growth caused by inactivation of both genes is mediated via the Swe1 protein kinase. Whereas Swe1 contributes noticeably to the effectiveness of haploid invasive growth under all conditions tested, its contribution to pseudohyphal growth is limited to the morphological response under standard assay conditions. However, Swe1 is essential for pseudohyphal differentiation under a number of nonstandard assay conditions including altered temperature and increased nitrogen. Swe1 is also required for pseudohyphal growth in the absence of Tec1 and for the induction of filamentation by butanol, a related phenomenon. Although inactivation of Hsl1 is sufficient to suppress the defect in filamentous growth caused by inactivation of Tec1 or Flo8, it is insufficient to promote filamentous growth in the absence of both factors. Moreover, inactivation of Hsl1 will not bypass the requirement for nitrogen starvation or growth on solid medium for pseudohyphal differentiation. We conclude that the Swe1 kinase modulates filamentous development under a broad spectrum of conditions and that its role is partially redundant with the Tec1 and Flo8 transcription factors.
ORGANISMS are able to respond to changes in environmental conditions via a broad spectrum of cellular responses. The nature and magnitude of those responses differ depending upon the type of cell and the degree to which it must individually cope with those changes. The demands upon free-living unicellular organisms to adapt to environmental change are greater than those of metazoan cells, which may be buffered by homeostatic mechanisms provided by the organism as a whole. Fungi, as free-living organisms, have developed the flexibility to deal with substantial changes in their environment including the quantity, quality, and location of nutrients. The capacity of many species of fungi to switch between a cellular yeast form and filamentous forms in response to environmental changes is one example of that flexibility that is well documented (reviewed in ![]()
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Although most laboratory strains of S. cerevisiae are incapable of filamentous differentiation (![]()
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A number of features of the cellular responses of haploid and diploid cells to filamentous differentiation signals are similar, although manifested to a different extent by each cell type (![]()
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The differentiation of invasive cells is thought to involve significant alteration of cell cycle dynamics (KRON et al. 1994). However, much of the evidence for alteration of the cell cycle derives from studies of populations of cells that have been induced to acquire the invasive phenotype via mutations that activate one of the pathways thought to transduce the differentiation signal. When the transcription factor, PHD1, is ectopically expressed, it induces pseudohyphal differentiation (![]()
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The morphogenetic changes associated with invasive growth are most consistent with hyperaccumulation of G1 cyclins and/or delayed activation of mitotic forms of the CDK. Although there is little reason a priori to exclude other mechanisms, inhibitory phosphorylation has received the most attention and is, therefore, the mechanism for which there is the best experimental understanding. Manipulation of Swe1, the budding yeast homolog of the fission yeast Wee1 protein kinase that catalyzes inhibitory tyrosine phosphorylation of Clb- associated forms of the Cdc28 CDK (![]()
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We have reexamined the role of Swe1 and its regulators in filamentous differentiation using the well-characterized invasive strain of S. cerevisiae,
1278b (![]()
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| MATERIALS AND METHODS |
|---|
Yeast media:
Growth, manipulation, and construction of yeast strains was performed by standard procedures unless otherwise indicated. Synthetic low ammonia dextrose plate (SLAD) contained 50 µm ammonium sulfate, 6.8 g/liter yeast nitrogen base without amino acids or ammonium sulfate, 2% dextrose, and 2% washed agar (![]()
Yeast strains and plasmids:
All yeast strains were derived in the
1278b background (![]()
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|
|
Filamentous assay conditions:
The
1278b yeast strain is the prototypical strain for analysis of both haploid invasive and pseudohyphal growth (![]()
For haploid invasive growth, the strains were patched on YEPD and pregrown at 30° for 2 days. Cells from these plates were plated in small patches on YEPD, YEP-GAL, or SC plates using a round glass rod to avoid disturbing the surface of the agar and incubated for 2 days at 30°. Haploid invasive growth was evaluated based upon three criteria. First, we analyzed the capacity of cells to resist removal from the surface of the plate under a stream of water (water washed). Next, the ability of cells to invade the agar was evaluated following "scrubbing" the surface of the plate with a gloved finger while washing under a stream of water (mechanically washed). Third, the cells remaining in the plate after mechanical washing were subjected to microscopic examination (invasive growth). Although these are qualitative assays, together they provide a number of criteria to judge the capacity of cells to differentiate. These include the ability of the cells to penetrate the agar, changes in cell morphology, and conversion of the budding pattern of cells from axial to unipolar budding.
For pseudohyphal development, strains were pregrown for 2 days on SD medium at 30° and then transferred to SLAD or modified SLAD plates, as indicated. To avoid disturbing the agar surface and the colony density-dependent inhibition of pseudohyphae formation (![]()
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Microscopy and imaging:
Microcolonies and colonies growing on plates were imaged from below through the agar and plastic petri dish with a Nikon Labophot microscope. Pixera VCS image-acquisition software and Pixera charge-coupled device camera were used to capture images at 1280 x 1024 resolution. Images were copied in Adobe Photoshop converted to gray scale, enhanced in contrast, and filtered to remove noise. Cells from suspension cultures were imaged with a Nikon Eclipse E800 microscope by using IPLAB Spectrum software and a Photmometrix Quantix camera. Images were flattened and copied into Photoshop. The size of the final images was reduced and then the cropped images were assembled into figures using Canvas 6 (Deneba).
| RESULTS |
|---|
Inactivation of Hsl1 and Hsl7 enhances filamentous differentiation via activation of the Swe1 protein kinase:
The similarity between the morphological phenotype of filamentous cells and that resulting from a decrease in the activity of mitotic forms of CDK has been well documented (![]()
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1278b (![]()
Diploid cells carrying disrupted alleles of either HSL1 or HSL7, which encode negative regulators of Swe1 (![]()
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/hsl1
, hsl7
/hsl7
, and hsl1
/hsl1
hsl7
/hsl7
diploid cells were substantially more filamentous and exhibited more robust pseudohyphal differentiation than wild-type cells grown on the same medium (Fig 1A and Fig 2C; Table 3). This is an adaptive response as demonstrated by the analysis of cell shape and budding pattern of the same cells in liquid YEPD (Table 3). We conclude that the hsl1
and hsl7
mutations enhance not only the cellular phenotype of the filamentous cells but also the penetrance of that phenotype in both haploid and diploid cells. Moreover, the two mutations do not have additive effects consistent with the epistasis analysis of these mutations in vegetative cells, indicating that HSL1 and HSL7 lie in the same pathway (![]()
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|
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|
Hsl1 and Hsl7 are thought to act as negative regulators of Swe1 by virtue of their ability to recruit Swe1 to the bud neck and regulate its phosphorylation and subsequent degradation (![]()
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and hsl7
mutants was mediated via SWE1. To do so, homozygous diploid hsl1
swe1
, hsl7
swe1
, and hsl1
hsl7
swe1
strains were compared to the wild-type strain in pseudohyphal growth assay (Fig 1B). The enhancement of filamentous differentiation resulting from inactivation of HSL1, HSL7, or both was suppressed by inactivation of Swe1. The hsl1
swe1
, hsl7
swe1
, and hsl1
hsl7
swe1
mutants all exhibited a substantial reduction in cell elongation, extent of unipolar budding, and filamentation relative to the same strains having wild-type SWE1 (Fig 1 and data not shown). However, despite the fact that inactivation of SWE1 suppressed the enhancement of filamentation caused by the hsl1
and the hsl7
mutations, the capacity of homozygous diploid hsl1
swe1
, hsl7
swe1
, and hsl1
hsl7
swe1
strains to undergo pseudohyphal differentiation appeared to be unaffected relative to the wild-type strain (Fig 1B). We have shown that swe1
suppresses the enhancement of haploid invasive growth observed in hsl1
, hsl7
, and hsl1
hsl7
mutants (data not shown). Thus, the enhancement of both forms of invasive growth by inactivation of HSL1 and/or HSL7 appears to be a consequence of hyperactivation of SWE1.
Swe1 contributes to filamentous growth under standard assay conditions:
The finding that inactivation of SWE1 blocked the enhancement of pseudohyphal growth caused by inactivation of HSL1 or HSL7 without diminishing that capacity relative to wild-type cells suggested that SWE1 is not required for pseudohyphal differentiation. Although a significant effect of swe1
on the haploid invasive behavior of wild-type cells in the D273 background was reported by ![]()
1278b background warranted further examination. We evaluated the behavior of haploid and diploid swe1
mutants in the haploid invasive and pseudohyphal growth assays. swe1
mutants show a modest but reproducible reduction in the effectiveness of haploid invasive growth based upon visual examination (Fig 2A). Consistent with previous results (![]()
/swe1
strains appear equally invasive after 5 and 10 days of growth (Fig 2B), consistent with the findings of ![]()
/swe1
cells as compared to the wild-type control (Table 3; Fig 2C). The length to width ratio of swe1
/swe1
cells forming filaments on SLAD plate is lower than that of wild-type cells. Moreover, swe1
/swe1
cells growing on SLAD exhibit less cell elongation and a lower frequency of unipolar budding in response to the pseudohyphal growth signals (nitrogen starvation and plate contact; Table 3). We conclude that swe1
is required for a full morphological response but not for substrate invasion during pseudohyphal growth and contributes to all aspects of haploid invasive growth under standard assay conditions.
Relationship between Swe1 and the MAPK and cAMP/PKA pathways:
Inactivation of SWE1 suppresses the strong enhancement of filamentous differentiation caused by hsl1
and hsl7
mutations and reduces the extent of morphological differentiation of otherwise wild-type pseudohyphal cells but does not appear to play a fundamental role in their invasive properties. There are two possible explanations for these results: either activation of Swe1 enhances the extent of filamentous differentiation via a pathway that is distinct from that used by wild-type cells or Swe1 activation modulates a pathway normally used to promote filamentous differentiation. To distinguish between these possibilities we examined the relationship between Swe1 and the signal transduction pathways involved in filamentous growth.
The cAMP and the MAPK pathways are known to play roles in transduction of the signals leading to differentiation of both pseudohyphal and haploid invasive cells (reviewed by ![]()
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-deficient strains and then the resulting strains were evaluated for their capacity to undergo filamentous differentiation (Fig 3). As previously reported, inactivation of either FLO8 or TEC1 resulted in a loss or substantial reduction in the capacity of both haploid and diploid cells to grow invasively (![]()
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or the flo8
mutation results in a substantial reduction in the invasiveness of haploid hsl1
strains (Fig 3A). However, despite the comparable effect of those mutations on invasiveness, there was a noticeable difference in the effect of the hsl1
mutation on haploid flo8
and tec1
strains (Fig 3A). Inactivation of FLO8 had little effect on the morphology of haploid hsl1
mutants growing on solid rich media whereas inactivation of TEC1 strongly suppressed the morphological response of the hsl1
cells.
|
Inactivation of HSL1 or HSL7 was much more effective in suppressing the defect in pseudohyphal differentiation resulting from inactivation of either TEC1 or FLO8 than it was in suppressing the defect in haploid invasive growth caused by the same mutations (Fig 3B). Whereas both tec1
/tec1
strains and flo8
/flo8
strains exhibited a substantial defect in the capacity to grow invasively (![]()
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/flo8
mutants to the hsl1
/hsl1
flo8
/flo8
mutants. Whereas the former shows neither morphological differentiation nor invasive growth, the latter is both highly elongated and highly invasive (Fig 3B). In contrast to the flo8
/flo8
mutants, the tec1
/tec1
strain retained some capacity to invade the agar and form filaments (![]()
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mutant suppressed both the morphological defect and the inability to invade (Fig 3B). Finally, the suppression of the filamentous growth defect of both haploid and diploid tec1
and flo8
strains caused by inactivation of HSL1 is dependent upon SWE1 (data not shown).
We have shown that the effect of inactivation of HSL1 upon both haploid invasive growth and pseudohyphal development is dependent upon SWE1 (Fig 1). Furthermore, it is sufficient to bypass the requirement for either TEC1, the primary output of the MAPK pathway, or FLO8, the primary output of the cAMP pathway, in mediating pseudohyphal differentiation (Fig 3B). Indeed, both haploid and homozygous diploid hsl1
tec1
swe1
and hsl1
flo8
swe1
strains were unable to invade or to undergo significant morphological differentiation (data not shown). Together, these results suggested that inactivation of HSL1 might be sufficient to promote pseudohyphal differentiation even in the absence of the filamentous signaling pathways. However, those same mutations in a tec1
flo8
strain are insufficient to promote filamentous differentiation in either haploid or diploid strains (Fig 3A and Fig B). In addition, we found that homozygous diploid hsl1
mutants were unable to undergo pseudohyphal differentiation, even after 20 days of growth if the SLAD medium was supplemented with a high level of nitrogen (Fig 3C). Finally, although hsl1
/hsl1
cells are modestly elongated in liquid medium (Table 3), they still exhibit a dramatic morphological response to low nitrogen and solid growth medium (Fig 1A and Fig 2C; Table 3). Thus, although inactivation of HSL1 is able to fully suppress the defect in the invasiveness of diploid cells caused by inactivation of either TEC1 or FLO8, hsl1
cells still depend upon the activity of at least one of those pathways (MAPK or cAMP/PKA) as well as on the normal stimuli for filamentous differentiation (contact with solid substrate and nitrogen starvation).
SWE1 is required for invasiveness of haploid and diploid cells in the absence of TEC1:
The findings described above suggested that activation of SWE1 might also be important for the residual invasive behavior exhibited by tec1
mutants. To determine whether that is the case, we analyzed invasive behavior of both haploid and diploid tec1
mutants having or lacking functional SWE1. In both cases, the modest invasiveness of tec1
mutants was found to depend upon SWE1 (Fig 4). This was most apparent when comparing the frequency of invasive tec1
/tec1
cells to that of tec1
/tec1
swe1
/swe1
cells on washed SLAD plates but could also be observed by comparing washed plates of tec1
and tec1
swe1
haploid strains. Furthermore, the extent of morphological differentiation appeared to be more compromised in tec1
swe1
mutants than in cells having a tec1
mutation alone. Thus, despite our failure to detect a contribution of SWE1 to the invasive behavior of otherwise wild-type strains, we have observed a substantial effect of the swe1
mutation upon the invasiveness of cells that are partially compromised in that capacity.
|
Swe1 is required for filamentous growth under suboptimal induction conditions:
The finding that SWE1 contributes to both haploid invasive and pseudohyphal growth in cells lacking TEC1 suggested that the contribution of SWE1 might be most significant when the signals for filamentous differentiation are compromised. Although pseudohyphal growth is most often assayed on minimal medium containing 50 µM ammonium sulfate (SLAD) at 30°, we also detect filamentous differentiation and invasiveness in the presence of 10-fold higher ammonium sulfate as well as on SLAD plates at lower or higher temperatures. To evaluate whether SWE1 is more important for filamentous growth under these "suboptimal" conditions, the effect of inactivation of SWE1 on the invasive behavior of cells was analyzed.
Inactivation of SWE1 has little if any effect upon the extent of pseudohyphal differentiation in otherwise wild-type cells under standard conditions. In contrast to its dispensability in cells growing on SLAD medium at 30° (Fig 2B), inactivation of SWE1 compromised pseudohyphal growth on the same medium at either 20° (data not shown) or 35° (Fig 5A). This is most obvious when the extent of morphological differentiation of the cells is examined. The swe1
mutants exhibit no elongation or filament formation after 1 day of growth. There is also a noticeable effect on the invasiveness and morphological differentiation of the cells observed after 5 days of growth as evidenced by the frequency of cells retained on the plate after washing and microscopic examination. Similarly, pseudohyphal growth is compromised in swe1
mutants growing at 30° on medium containing 500 µM (rather than 50 µM) ammonium sulfate (Fig 5A). However, the morphogenesis defect of swe1
mutants grown at higher nitrogen levels is less apparent. Furthermore, we have examined the effect of alternative carbon sources (raffinose/galactose) and nitrogen sources (leucine and proline) on pseudohyphal growth of wild-type and swe1
mutant cells. In all cases, inactivation of SWE1 had a readily detectable effect on the ability of cells to undergo pseudohyphal differentiation (data not shown). Finally, under all conditions tested inactivation of hsl1
led to the enhancement of pseudohyphal differentiation (Fig 5A and data not shown).
|
We obtained similar results with haploid mutant strains growing on solid rich medium containing either glucose (YEPD) or galactose (YEPGal, data not shown) as a carbon source as well as on synthetic complete medium with glucose as carbon source (SC; Fig 5B). Whereas on YEPD medium swe1
mutants were only slightly compromised in their capacity to invade, no invasive growth was observed under the nonstandard conditions. In all cases, hyperactivation of SWE1 caused a modest but noticeable increase in invasiveness. We conclude that Swe1 is essential for filamentous differentiation under a variety of nonstandard induction conditions.
Swe1 is essential for induction of filamentous growth by butanol:
It has been recently shown that fusel alcohols, notably butanol, induce filamentous growth in haploid cells on both solid and liquid media (![]()
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strain (data not shown). Interestingly, the swe1
strain was substantially compromised in its capacity to undergo butanol-induced differentiation. This was manifested by an inability to differentiate into elongated cells despite acquisition of the unipolar budding pattern in at least some of the cells (Fig 6A). Although haploid cells do not normally undergo invasive differentiation on SLAD plates, they do so in the presence of 1% butanol (![]()
|
In contrast to its effect on haploid cells, diploid cells growing on SLAD plates containing 1% butanol exhibited a partial inhibition of pseudohyphal development (Fig 6B). As in other nonstandard conditions for pseudohyphal differentiation that we have examined, inactivation of SWE1 resulted in a strong reduction in invasive growth in the presence of butanol (Fig 1 and Fig 6B). That reduction, as in butanol-induced filamentation in haploid cells, was accompanied by failure to develop elongated cell morphology and the retention of unipolar budding. Although ethanol was also shown to stimulate pseudohyphal development of diploid strains (![]()
| DISCUSSION |
|---|
We have performed an in-depth investigation of the role of the Swe1 protein kinase, a negative regulator of Clb-associated CDK activity (![]()
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and hsl7
mutant strains still depend upon the normal filamentous growth signals (contact with a solid substrate, nitrogen starvation, and a functional MAPK or cAMP/PKA pathway). Moreover, we show that the enhancement of both haploid invasive growth and pseudohyphal growth that occurs in response to inactivation of either Hsl1 or Hsl7 is dependent upon a functional Swe1. Thus, activation of Swe1 is sufficient to explain the enhancement of invasive growth resulting from Hsl1 and Hsl7 inactivation.
Swe1 is likely to exert its effect on filamentous differentiation via its capacity to phosphorylate and inactivate the Cdc28 CDK (![]()
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It was recently reported that inactivation of Hsl7 enhances pseudohyphal growth whereas overexpression leads to its repression (![]()
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swe1
mutants were more invasive than wild-type cells. Nevertheless, the two findings might not be contradictory. It is known that Swe1 activation, via inhibition of mitotic forms of the CDK, prolongs the period during which G1 cyclin-associated CDK remains active and, thereby, the extent of polarized growth (![]()
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We demonstrate that deregulation of Swe1 strongly enhances filamentous growth. Although cells with activated Swe1 still depend upon the normal signals for filamentous growth, Swe1 activation is sufficient to promote invasive behavior even in the absence of either Tec1 or Flo8, downstream targets of the MAPK and cAMP/PKA pathways, respectively. Together with previous studies, these findings support a model in which modulation of CDK activity plays a central role in filamentation (![]()
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Despite the capacity of hyperactivated Swe1 to effectively suppress the defect in invasiveness caused by inactivation of either Flo8 or Tec1, there are striking differences between the effect of flo8
and tec1
mutants on filamentous differentiation. First, in diploid cells, TEC1, but not FLO8, is required for cell elongation (![]()
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mutant population (![]()
mutants (![]()
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mutants, that suppression is inefficient. This suggests that Swe1 cannot activate but, instead, modulates the Tec1-dependent filamentous signal that promotes cell elongation. Furthermore, Swe1 activation induces cell-cell adhesion in an otherwise defective flo8
strain, perhaps indirectly through modulation of a target of Tec1 such as Flo11 (![]()
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Our results demonstrate that Swe1 contributes to pseudohyphal and haploid invasive growth under standard assay conditions. Although inactivation of Swe1 has a noticeable effect on the efficiency of invasive growth of haploid cells and on morphological differentiation of diploid cells, the invasiveness of diploid swe1
mutants is largely indistinguishable from that of wild-type cells (![]()
mutants. This suggests that these two proteins act coordinately to induce filamentous differentiation. Moreover, consistent with previous observations (![]()
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(Fig 6) or tec1
(![]()
It has been suggested that CDKs are the targets of pseudohyphal growth signals (![]()
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The model proposed above raises important questions. Is the Swe1 protein kinase regulated in response to signals that promote invasive growth and, if so, via what mechanism? This question has yet to be adequately addressed. Both direct and indirect mechanisms by which invasive growth signals might enhance Swe1 activity can be envisioned. Since SWE1 is a target of the G1-specific transcription system (![]()
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The ability to switch from a yeast form to a filamentous form is also typical of many fungal pathogens (reviewed in ![]()
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| FOOTNOTES |
|---|
1 Permanent address: Department of Bacteriology and Medical Mycology, Istituto Superiore di Sanità, 00161 Rome, Italy. ![]()
| ACKNOWLEDGMENTS |
|---|
We thank Anne Dranginis, Tracie Bierwagen, Alan Myers, Danny Lew, Monique Smeets, Steven Reed, Jonathan Loeb, and Haoping Liu for strains and plasmids. We also thank Alan Myers and members of the TSRI Cell Cycle Group (the S. Reed, P. Russell, C. McGowan, and C. Wittenberg laboratories) for their comments and support during the course of this research. R.L.V. is supported by an AIDS fellowship from the National AIDS Program, Istituto Superiore di Sanità, Italy. Support for this project was from US Public Health Service grant GM-43487 to C.W.
Manuscript received November 29, 2000; Accepted for publication February 21, 2001.
| LITERATURE CITED |
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