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Partitioning of N-Ethylmaleimide-Sensitive Fusion (NSF) Protein Function in Drosophila melanogaster: dNSF1 Is Required in the Nervous System, and dNSF2 Is Required in Mesoderm
Jessica A. Golbya, Leigh Anna Tolara, and Leo Pallanckaa Department of Genetics, University of Washington, Seattle, Washington 98195
Corresponding author: Leo Pallanck, Department of Genetics, University of Washington, Health Sciences J113, Box 357360, Seattle, WA 98195., pallanck{at}genetics.washington.edu (E-mail)
Communicating editor: R. S. HAWLEY
| ABSTRACT |
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The N-ethylmaleimide-sensitive fusion protein (NSF) promotes the fusion of secretory vesicles with target membranes in both regulated and constitutive secretion. While it is thought that a single NSF may perform this function in many eukaryotes, previous work has shown that the Drosophila genome contains two distinct NSF genes, dNSF1 and dNSF2, raising the possibility that each plays a specific secretory role. To explore this possibility, we generated mutations in the dNSF2 gene and used these and novel dNSF1 loss-of-function mutations to analyze the temporal and spatial requirements and the degree of functional redundancy between dNSF1 and dNSF2. Results of this analysis indicate that dNSF1 function is required in the nervous system beginning at the adult stage of development and that dNSF2 function is required in mesoderm beginning at the first instar larval stage of development. Additional evidence suggests that dNSF1 and dNSF2 may play redundant roles during embryonic development and in the larval nervous system. Ectopic expression studies demonstrate that the dNSF1 and dNSF2 gene products can functionally substitute for one another. These results indicate that the Drosophila NSF proteins exhibit similar functional properties, but have evolved distinct tissue-specific roles.
VESICLE trafficking in the constitutive and regulated secretory pathways requires a set of core polypeptides that mediate interactions between the transport vesicle and the target membrane. Among these core polypeptides are vesicular membrane proteins known as v-SNAREs, target membrane proteins known as t-SNAREs, and a soluble ATPase known as the N-ethylmaleimide-sensitive fusion protein (NSF). Although the precise functional roles of these components in vesicle exocytosis remain unclear, a large body of work has demonstrated that v-SNAREs and t-SNAREs can assemble to form a complex and that NSF can catalyze disassembly of this complex by coupling SNARE complex disassembly to ATP hydrolysis (![]()
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More recent work suggests the possibility of novel functional roles for NSF. ![]()
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To elucidate the cellular functions of NSF, we have chosen to use a genetic approach in the fruit fly, Drosophila melanogaster. Previous work has shown that there are two Drosophila NSF genes encoding polypeptides with 84% amino acid identity to one another, designated dNSF1 and dNSF2 (![]()
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While studies of the dNSF1comt mutants have told us much about the role that dNSF1 plays in neurotransmitter release, several features of dNSF1 function remain unexplored. For example, while it is well established that dNSF1 plays an important presynaptic role in the adult nervous system, it is not known whether it plays a similar functional role prior to the adult stage of development. Further, it remains unknown whether dNSF1 functions in a postsynaptic capacity to regulate glutamate receptor function or whether dNSF1 plays secretory roles outside of the nervous system. It also remains completely unclear what function is provided by the closely related dNSF2 gene. To investigate these issues, we generated mutations in dNSF2 and subjected dNSF2 mutants, along with novel loss-of-function dNSF1 mutants, to molecular and genetic analysis. Results of these analyses show that dNSF2 function is required for viability beginning at the first instar larval stage of development, while dNSF1 function is required for viability at the adult stage of development. Transgenic rescue experiments using the GAL4 system (![]()
| MATERIALS AND METHODS |
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Generation of dNSF2 mutations:
Identification of chromosomes with deficiencies that remove the dNSF2 gene was carried out using in situ hybridization to Drosophila polytene chromosomes as previously described (![]()
Transgenic Drosophila lines:
The dNSF1 transgene consisting of a dNSF1 cDNA under control of an hsp70 heat-shock promoter has been described (![]()
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A heat-shock-inducible dNSF2 transgenic line was used to rescue candidate dNSF2 mutants recovered in the Df(3R)urd interval by crossing the candidate dNSF2 mutants to a stock bearing the dNSF2 transgene in trans to an SM5 balancer chromosome and the Df(3R)urd chromosome in trans to the TM3 balancer chromosome and maintaining the offspring at 25°. dNSF2 mutants were identified as those stocks producing non-SM5, non-TM3 adult flies from this cross. To rescue dNSF2 mutants with the heat-shock dNSF1 transgenic line, flies were subjected to heat shocks of 38° for 1 hr each day throughout development. To test for rescue of the dNSF1comt temperature-sensitive paralytic phenotype, adult male flies bearing a dNSF1comt mutation, a UAS-dNSF1 or UAS-dNSF2 transgenic line, and the relevant GAL4 line were aged 36 days and examined in groups of 10 as described (![]()
Sequencing of dNSF1 and dNSF2 mutations:
To generate flies suitable for isolating the dNSF1 mutations for sequence analysis, females bearing the dNSF1clp and dNSF13-13-3 alleles in trans to the FM7 balancer chromosome were crossed to males bearing a heat-shock-inducible dNSF1 transgene. Offspring from this cross were subjected to daily heat shocks of 1 hr at 38° to allow survival of hemizygous dNSF1clp and dNSF13-13-3 adult males. Genomic DNA was extracted from the hemizygous dNSF1 mutants and subjected to polymerase chain reaction using primers flanking the dNSF1 open reading frame. PCR products corresponding to the dNSF1 mutant alleles were separated from the smaller PCR product derived from the dNSF1 cDNA transgene using agarose gel electrophoresis. The dNSF1clp and dNSF13-13-3 PCR products were recovered from the agarose gel and subjected to dideoxy sequencing using a combination of primers that allow full coverage of the entire dNSF1 open reading frame.
A similar strategy was used to sequence the dNSF2 mutations. Crosses were carried out to generate flies bearing the dNSF2 mutations in trans to the Df(3R)urd chromosome in a background of transgenic dNSF2 expression. dNSF2 sequences were amplified using PCR primers flanking the dNSF2 open reading frame, and the resulting products were fractionated on agarose gels to separate the dNSF2 mutant alleles from the smaller dNSF2 transgenic product. The relevant PCR products were recovered from the agarose gel and subjected to dideoxy sequencing using primers that allow full coverage of the dNSF2 open reading frame.
Germline clone analysis:
To generate female germlines homozygous for dNSF1 or dNSF2 mutations, the FLP/FRT, ovoD1 system was used. Recombinant chromosomes bearing the dNSF1clp or dNSF13-13-3 mutations as well as a proximal FRT101 element were kindly provided by Rick Ordway, and a chromosome bearing the dNSF255 mutation with a proximal FRT82B element was generated. dNSF1 germline clones were generated by mating females bearing the dNSF1clp FRT101 or dNSF13-13-3 FRT101 chromosomes in trans to the FM7 balancer chromosome to FRT101 ovoD1; hsFLP/hsFLP males. Offspring from this cross were heat shocked at 38° for 2 hr each day for two successive days beginning at the first instar larval stage of development to induce expression of the FLP recombinase from the heat-shock promoter. Because both heterozygous and homozygous ovoD1-bearing germline clones degenerate (![]()
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dNSF2 germline clones were generated by mating females bearing the dNSF255 FRT82B chromosome in trans to a TM3 balancer chromosome to hsFLP; FRT82B ovoD1 males. Offspring from this cross were heat shocked to induce expression of the FLP recombinase as described above, and female progeny were mated to males bearing the dNSF2 deletion chromosome, Df(3R)urd, in trans to a TM3 balancer chromosome marked with GFP. dNSF255/Df(3R)urd embryos were identified by their lack of GFP fluorescence and monitored daily until lethality was observed.
Preparation and analysis of SNARE complexes:
Flies used for examination of SNARE complexes were aged 36 days. Samples for SNARE complex analysis were prepared and subjected to electrophoresis and electroblotting onto nitrocellulose membranes as described (![]()
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Fly strains:
The GAL4 driver lines used include the following: w- P{[w+] elavC155-GAL4} (![]()
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| RESULTS |
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Generation of dNSF2 mutations:
The Drosophila dNSF2 gene has been previously localized to polytene region 87F14-15 on the right arm of chromosome 3 (![]()
7000 EMS-mutagenized third chromosomes, 18 mutations were recovered that were lethal in trans to the Df(3R)urd chromosome. Crosses conducted with these 18 mutants indicated that they represent six complementation groups, each containing between one and seven alleles.
To determine which of these complementation groups represent dNSF2, a transposable P-element construct containing a dNSF2 cDNA under the control of a heat-shock-inducible promoter was introduced into the Drosophila germline and tested for its ability to rescue the lethality associated with the 18 candidate dNSF2 mutations. The results of this analysis indicate that the dNSF2 gene is represented by eight recessive lethal alleles. Six of the seven alleles from one complementation group (designated dNSF211, dNSF215, dNSF242, dNSF255, dNSF2102, and dNSF2103) were efficiently rescued from lethality by the dNSF2 transgene, and all of the rescued flies appeared normal and were fertile in crosses. The one allele from this complementation group that could not be rescued by the dNSF2 transgene (dNSF266) also failed to complement a mutation in a distinct complementation group, suggesting that the dNSF266 mutation may affect more than one gene. The dNSF2 transgene also rescued a mutation that complemented all of the other mutations in the Df(3R)urd interval (designated dNSF221), indicating that this mutation may represent a hypomorphic dNSF2 allele.
Characterization of dNSF2 mutants:
In an effort to rank the different dNSF2 alleles in terms of their severity, the dNSF2 mutants were subjected to lethal phase analysis, and the molecular nature of these alleles was determined through direct sequencing of genomic DNA. All of the dNSF2 mutants appear to develop normally as embryos, are able to hatch from the egg case, and show normal larval locomotion as hemizygotes with the Df(3R)urd chromosome. However, the most severe dNSF2 mutants ceased moving and died during the mid-first instar larval stage of development (Table 1). Two of the most severe alleles, dNSF215 and dNSF255, contain premature stop codons in the dNSF2 coding sequence and likely represent null alleles of the dNSF2 gene (Fig 1). Another of the most severe alleles, dNSF2103, results in the replacement of the final 314 codons of the dNSF2 gene with 43 novel codons followed by a premature translation termination signal (Fig 1). The remaining alleles were found to be missense mutations or were devoid of mutations in the coding sequence, and most were found to cause death later in development, suggesting that many of these mutations are not null alleles of dNSF2 (Fig 1; Table 1).
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To investigate whether the lethal phase of the dNSF2 mutants is influenced by a possible maternal deposition of dNSF2 protein, the FLP/FRT, ovoD1 system (![]()
Characterization of dNSF1 mutants:
To compare and contrast dNSF2 and dNSF1 function, severe loss-of-function alleles of dNSF1 were obtained and characterized. The recessive lethal alleles of dNSF1 chosen for this analysis, dNSF1clp (kindly provided by K. S. Krishnan) and dNSF13-13-3 (kindly provided by S. Titus and B. Ganetzky), were obtained from noncomplementation screens using the conditional comatose alleles of the dNSF1 gene. Direct sequencing of genomic DNA corresponding to the dNSF1clp allele revealed a one-nucleotide deletion in the carboxy-terminal coding region of the dNSF1 gene, which, if translated, would produce a dNSF1 polypeptide with 18 novel amino acids replacing the normal 37 carboxy-terminal amino acids (Fig 1). The dNSF13-13-3 allele contains a missense mutation that results in an E to K substitution at amino acid position 606 of the second ATPase domain (Fig 1). While the nature of the molecular lesions associated with these two dNSF1 loss-of-function alleles leaves open the possibility for residual dNSF1 function, Western blot analysis of protein extracts obtained from dNSF1clp mutants indicates that this allele fails to produce detectable dNSF1 protein (data not shown). Thus, the dNSF1clp mutation may represent a null allele of this gene.
Lethal phase analysis conducted with males hemizygous for the dNSF1clp and dNSF13-13-3 alleles indicates that these mutations result in pharate adult lethality (Table 1). In many cases the flies bearing these mutations manage to protrude their heads out of the pupal case, but they are rarely able to eclose completely. When dissected from the pupal case, the dNSF1clp and dNSF13-13-3 mutants appear morphologically normal but are incapable of coordinated movement and die within several days. The lethal phase of these mutants cannot be explained by secondary mutations residing on the X chromosomes bearing the dNSF1clp and dNSF13-13-3 mutations, as males bearing these alleles can be fully rescued by ectopic expression of dNSF1 protein from a transgene (see below).
A possible maternal contribution of dNSF1 protein does not appear to account for the survival of the most severe dNSF1 mutants to the pharate adult stage of development. The FLP/FRT, ovoD1 system (![]()
Although hemizygous male larvae bearing these dNSF1 alleles are viable, they exhibit several phenotypes. For example, when rolled onto their dorsal surface, the larvae take far longer to reorient to their ventral surface than do wild-type larvae (data not shown). In addition, dNSF1clp and dNSF13-13-3 hemizygous male larvae are often found protruding vertically from the surface of the medium for long periods of time and often burrow deeply into the medium and die, possibly as a result of suffocation. dNSF1clp and dNSF13-13-3 hemizygous male larvae also accumulate gas in their intestinal tract, which may result from a defect in secretion of digestive enzymes. These results indicate that the dNSF1 gene provides a nonessential function during the larval stage of development.
Tissue requirements of dNSF1 and dNSF2:
To identify tissues requiring dNSF1 and dNSF2 function, the GAL4/UAS system (![]()
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To examine whether similar neural expression of dNSF2 protein could rescue the lethality associated with dNSF2 mutations, UAS-dNSF2 transgenic lines were generated and tested for their ability to rescue dNSF2 mutants using the elav-GAL4 driver (Fig 3A). Three of the most severe dNSF2 alleles (dNSF215, dNSF255, and dNSF2103) and two independent UAS-dNSF2 lines (designated 2A and 23A) were tested in this analysis. Crosses involving dNSF215 and dNSF2103 alleles produced no rescued adult offspring, and those involving the dNSF255 mutation produced only three apparently rescued adult offspring among the >750 adults scored from this cross (Fig 3C, solid bar). Further analysis of dNSF2 mutants expressing dNSF2 in the nervous system indicates that this manipulation results primarily in first and second instar larval lethality, with a small percentage of offspring surviving to later stages of development. These results suggest that dNSF2 plays some role in the nervous system. However, neural expression of dNSF2 alone is insufficient for efficient rescue of the dNSF2 mutant phenotype.
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Recent studies demonstrating a direct involvement of the vertebrate NSF in glutamate receptor function (![]()
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To confirm these findings, several additional mesoderm-specific GAL4 lines were tested for their ability to mediate rescue of the recessive lethal dNSF2 mutant phenotype. These GAL4 lines were also used to test whether mesoderm expression of dNSF1 is capable of rescuing the dNSF1 mutant phenotypes. For this analysis, only the dNSF1clp and dNSF215 alleles were used in conjunction with the UAS-dNSF1 21A and UAS-dNSF2 2A transgenes, respectively. All of the mesoderm-specific GAL4 lines tested mediated rescue of the dNSF2 mutation to at least 40% of expected Mendelian levels, while none of those tested produced any rescue of the dNSF1 mutation (Table 2). These results verify that the primary function of dNSF2 resides in mesoderm and indicate that the dNSF1 mutant phenotype can be rescued only by nervous system expression of dNSF1 protein.
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Intergenic complementation analysis:
To investigate the degree of functional overlap between the two Drosophila NSF proteins, the ability of dNSF1 and dNSF2 to substitute for one another when ectopically expressed was examined using the GAL4/UAS system. Because dNSF1 gene function is required in the nervous system, we sought to test whether a UAS-dNSF2 transgene, expressed in neural tissue under the direction of elav-GAL4, could rescue the phenotypes associated with mutations in the dNSF1 gene. For these crosses, females bearing an elav-GAL4 element and a dNSF1 mutation were crossed to males homozygous for a UAS-dNSF2 transgene (Fig 4A). Results of these crosses indicate that dNSF2 expression in the nervous system is sufficient to rescue the lethality of the dNSF1clp and dNSF13-13-3 mutations (Fig 4B). Similarly, expression of dNSF2 in the nervous system rescued the temperature-sensitive paralytic phenotype of the dNSF1comt st17 and dNSF1comt tp7 mutants. The extent of rescue of the dNSF1 mutations by dNSF2 is comparable to that observed when these mutations are rescued by neural expression of dNSF1 protein.
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Previous work conducted with the dNSF1comt alleles has demonstrated that a neural SNARE complex composed of a v-SNARE, n-synaptobrevin, and two t-SNAREs, SNAP-25 and syntaxin, accumulates at the dNSF1comt restrictive temperature (![]()
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To investigate whether ectopic expression of dNSF1 in mesoderm can rescue the dNSF2 mutant phenotype, we tested whether a UAS-dNSF1 transgene expressed using 24B-GAL4 could rescue the lethality associated with the dNSF215, dNSF255, and dNSF2103 mutations. None of these crosses produced rescued progeny from among the >350 flies counted per cross, indicating that dNSF1 expression in mesoderm is insufficient to rescue the dNSF2 mutations. As mesoderm expression of dNSF2 was only partially capable of rescuing lethality of the dNSF2 mutations, we investigated whether more widespread and possibly higher levels of dNSF1 expression could rescue the dNSF2 mutant phenotype. To perform these experiments, we made use of a heat-shock-inducible dNSF1 transgene. The heat-shock dNSF1 transgene was introduced into a dNSF2 mutant background by mating flies bearing this transgene and the Df(3R)urd chromosome to flies bearing one of the three dNSF2 alleles and subjecting the progeny to daily heat shocks throughout development (Fig 6A). In contrast to the lack of rescue of dNSF2 mutations observed when dNSF1 expression is restricted to mesoderm, significant numbers of rescued progeny were observed using an extensive heat-shock regimen to drive ubiquitous expression of dNSF1 protein, demonstrating that dNSF1 protein is capable of rescuing mutations in dNSF2 (Fig 6B). Together these results show that the dNSF1 and dNSF2 proteins are capable of substituting for one another under defined conditions of expression.
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| DISCUSSION |
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In an effort to explore the functions of the two NSF genes in Drosophila, we generated mutations in the dNSF2 gene and used novel recessive lethal alleles of dNSF1 to examine the temporal and spatial requirements and degree of functional overlap between these two genes. Our results show that both Drosophila NSF genes are required for viability. Lethal phase and germline clone analyses of these mutants show that dNSF1 function is required for viability at the adult stage of development, while the requirement for dNSF2 begins at the first instar larval stage. Ectopic expression studies demonstrate that the essential function of dNSF1 resides in the nervous system, while the essential function of dNSF2 resides in mesoderm. Despite their differing temporal and spatial requirements, ectopic expression studies show that although they do not normally do so, the dNSF1 and dNSF2 proteins are capable of substituting for one another, indicating that they have overlapping functional properties.
The finding that expression of dNSF1 in the nervous system rescues the recessive lethal and temperature-sensitive paralytic dNSF1 mutant phenotypes is consistent with the well-characterized functional role of dNSF1 in neurotransmission (![]()
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In contrast to results obtained in studies of the dNSF1 mutations, ectopic expression of dNSF2 protein in the nervous system was insufficient for significant rescue of the recessive lethal dNSF2 mutant phenotype. Instead, rescue of the dNSF2 mutants was produced by ectopic expression of dNSF2 protein in mesoderm. These results are supported by previous work establishing that dNSF2 is expressed in this tissue (![]()
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Alternatively, another possible role for dNSF2 in muscle is suggested by recent work demonstrating that postsynaptic glutamate receptor function or subcellular localization is regulated by NSF in the vertebrate nervous system (![]()
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In addition to the role of dNSF2 in mesoderm, the increased efficiency of rescue of dNSF2 mutations mediated by simultaneous expression of dNSF2 in the nervous system and mesoderm indicates that dNSF2 also functions in the nervous system. This is also supported by the finding that expression of dNSF2 in the nervous system alone can extend the lethal phase of the dNSF2 mutants. It is possible that dNSF2 participates in constitutive vesicle trafficking in the nervous system, and/or that dNSF2 collaborates with dNSF1 in presynaptic neurotransmitter release mechanisms, as suggested by experiments showing that dNSF2 can rescue the dNSF1 mutations and can participate in neural SNARE complex disassembly. Alternatively, dNSF2 may be involved in regulating postsynaptic membrane insertion or localization of glutamate receptors in the central nervous system. Future electrophysiological studies and glutamate receptor localization experiments involving the dNSF2 mutants should resolve these possibilities.
A somewhat surprising result emerging from our studies is that neither dNSF1 nor dNSF2 is singly required for embryonic development and early larval locomotion. This observation could be accounted for in three ways: dNSF1 and dNSF2 may be redundant at these stages of development, a distantly related Drosophila NSF homolog may promote secretion in embryos, or there may be no requirement for NSF-like activity in developing embryos. The last possibility appears highly unlikely, since several other secretory components that interact either directly or indirectly with NSF have been shown to be required for embryonic development (![]()
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Although previous work has shown that ectopic expression of dNSF1 protein from a heat-shock-inducible transgene can rescue the neural SNARE complex accumulation phenotype of the dNSF1comt mutants to near wild-type levels (![]()
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It is notable that despite their differing spatial requirements, the two Drosophila NSF proteins are capable of substituting for one another when expressed ectopically. Specifically, dNSF2 can substitute for dNSF1 when expressed in the nervous system, and dNSF1 can substitute for dNSF2 when expressed ubiquitously from a heat-shock promoter. Although it remains unclear why expression of dNSF1 in mesoderm alone fails to rescue the dNSF2 mutants, a likely possibility is that dNSF1 does not efficiently substitute for dNSF2. Our experiments involving dNSF2 transgenes indicate that optimal rescue of dNSF2 mutants requires expression in both mesoderm and neural tissue. The fact that dNSF1 can rescue dNSF2 mutants only when expressed from a heat-shock promoter may reflect the broader expression conferred by this system or possibly higher levels of expression resulting from the extensive heat-shock regimen employed (see MATERIALS AND METHODS). Additional experiments using heat-shock promoter-driven constructs, suggest that dNSF2 does not substitute efficiently for dNSF1 (R. ORDWAY, personal communication; our data not shown). These cross-rescue barriers, preventing efficient substitution of one NSF for the other, may involve subtle differences in the functional properties of the proteins, differential stabilities of the two proteins in the various tissues examined, sequence elements in the dNSF1 and dNSF2 mRNAs responsible for proper mRNA metabolism, or any combination of these three possibilities. Recent studies suggest that untranslated sequence elements in the dNSF1 and dNSF2 mRNAs are at least one important determinant preventing efficient cross-rescue (R. ORDWAY, personal communication).
The reason that Drosophila requires two closely related NSF genes remains unclear. Searches of the Caenorhabditis elegans and human genome databases reveal the presence of only one NSF gene in each of these two organisms, indicating that a single NSF gene is sufficient to support constitutive and regulated secretion, and possibly postsynaptic glutamate receptor regulation in these eukaryotes. However, this finding does not rule out the possible presence of multiple NSF proteins resulting from alternative splicing of the single NSF gene in these organisms. Evidence in support of this possibility is provided by Northern blot analysis of the rat NSF gene (![]()
| ACKNOWLEDGMENTS |
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The authors express their gratitude to the following individuals: Carrie Jones and Robert Kreber for their assistance in the genetic screen to generate dNSF2 mutants; K. S. Krishnan and Barry Ganetzky for providing dNSF1 loss-of-function mutations; Steve Titus for assistance in sequencing of dNSF1 and dNSF2 alleles; Hugo Bellen and Mingli Zhao for generating UAS-dNSF2 transgenic lines, providing GAL4 lines, and providing insight into the tissues requiring dNSF2 function; Regis Kelly for providing antiserum to n-synaptobrevin; Richard Ordway for providing dNSF1 FRT101 recombinant chromosomes and GAL4 lines and for communication of unpublished results; and Liqun Luo and Meg Winberg for providing GAL4 lines. We also thank all members of the Pallanck lab for critical reading of the manuscript. Finally, special thanks to Barry Ganetzky, in whose laboratory some of this work was performed. This work was supported by a University of Washington Royalty Research Fund Grant and a National Science Foundation CAREER award.
Manuscript received October 19, 2000; Accepted for publication January 26, 2001.
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