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A Genetic Screen for Modifiers of Drosophila Src42A Identifies Mutations in Egfr, rolled and a Novel Signaling Gene
Qian Zhanga, Qingxia Zhenga, and Xiangyi Luaa Department of Molecular Biosciences, The University of Kansas, Lawrence, Kansas 66045
Corresponding author: Xiangyi Lu, Department of Molecular Biosciences, The University of Kansas, Lawrence, KS 66045., xlu{at}kuhub.cc.ukans.edu (E-mail)
Communicating editor: T. SCHÜPBACH
| ABSTRACT |
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Drosophila Src42A, a close relative of the vertebrate c-Src, has been implicated in the Ras-Mapk signaling cascade. An allele of Src42A, Su(Raf)1, dominantly suppresses the lethality of partial loss-of-function Raf mutations. To isolate genes involved in the same pathway where Src42A functions, we carried out genetic screens for dominant suppressor mutations that prevented Su(Raf)1 from suppressing Raf. Thirty-six mutations representing at least five genetic loci were recovered from the second chromosome. These are Drosophila EGF Receptor (Egfr), rolled, Src42A, and two other new loci, one of which was named semang (sag). During embryogenesis, sag affects the development of the head, tail, and tracheal branches, suggesting that it participates in the pathways of Torso and DFGF-R1 receptor tyrosine kinases. sag also disrupts the embryonic peripheral nervous system. During the development of imaginal discs, sag affects two processes known to require Egfr signaling: the recruitment of photoreceptor cells and wing vein formation. Thus sag functions in several receptor tyrosine kinase (RTK)-mediated processes. In addition, sag dominantly enhances the phenotypes associated with loss-of-function Raf and rl, but suppresses those of activated Ras1V12 mutation. This work provides the first genetic evidence that both Src42A and sag are modulators of RTK signaling.
RECEPTOR tyrosine kinases (RTKs) form a large and important class of cell surface receptors that regulate cell proliferation, differentiation, survival, and numerous other biological processes. All known RTKs stimulate the highly conserved Ras-Mapk protein phosphorylation cascade. The cascade is initiated following the activation of an RTK, which recruits the Grb2-Sos complex to the site of Ras-GDP, thereby triggering the release of GDP and formation of Ras-GTP (![]()
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The current excitement in the field is the identification of many branch pathway components that feed into this seemingly obligatory sequential activation cascade from Ras to Mapk. For example, mutations in kinase suppressor of Ras (ksr), identified in both Drosophila and Caenorhabditis elegans, impair RTK signaling (![]()
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To investigate other possible Ras-independent means of activating the Mapk cascade, we have isolated mutations that suppress the lethality of a Drosophila Raf mutation [also referred to as l(1) pole hole], RafC110, which cannot interact with Ras1 (![]()
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Raf transduces signals from several RTKs throughout Drosophila development (![]()
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Six extragenic Su(Raf) loci have also been identified. These mutations not only suppress RafC110 but also other partial loss-of-function Raf alleles that do not impair Ras-Raf binding (![]()
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We named and characterized one of the novel suppressor loci semang (sag). sag is required during both embryonic and imaginal disc development. Mutations in sag cause zygotic lethality. To identify developmental pathways where sag functions, we have examined the phenotypes associated with sag mutations with particular attention to those processes controlled by known Drosophila RTKs. The results of these analyses show that sag participates in the Torso (Tor) and Drosophila DFGF-R1 RTK pathways during embryonic development. During imaginal disc development, sag mutations affect two processes known to require Egfr signaling: the recruitment of photoreceptor cells and wing vein formation. Thus sag functions broadly in several RTK-mediated processes. This role of sag in RTK signaling is further supported by the genetic interaction between sag and other known RTK signaling genes. sag dominantly enhances the phenotypes caused by reductions of RTK signaling in loss-of-function Raf or rl mutants. Consistent with this, sag dominantly suppresses the formation of supernumerary R7 cells caused by the activated sev-Ras1V12 mutation (![]()
| MATERIALS AND METHODS |
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The genetics of Su(Raf)1:
This mutation was isolated as an extragenic suppressor of RafC110 located on the right arm of the second chromosome (![]()
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The genetic screen:
The screen was designed to isolate suppressors of Su(Raf)1 on the second chromosome. Suppressor mutations induced on the third chromosome were not saved. Approximately 20,000 F1 progeny were screened and 36 mutations were obtained. All mutations isolated were recessively lethal and were classified into five lethal complementation groups. Each group was then tested for complementation with known RTK signaling mutations on the second chromosome.
Figure 1 shows the genetic scheme for the mutagenesis of marked second chromosome P(w+, FRT)42B (![]()
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In an attempt to isolate intragenic revertants of Su(Raf)1, males of genotype Su(Raf)1 P(w+, FRT)42B/CyO were treated with EMS and mated en masse with w; Sco/CyO female virgins. Next, male progeny of genotype Su(Raf)1 P(w+, FRT)42B */CyO were crossed individually to six female virgins of genotype FM7/y RafC110. If no y RafC110/Y; Su(Raf)1 P(w+, FRT)42B */+ males lived, a suppressor mutation on the Su(Raf)1 P(w+, FRT)42B parental chromosome was then recovered from the female siblings. However, only extragenic suppressors were isolated.
The suppressor mutations of Su(Raf)1:
Two novel suppressor loci were identified in addition to Egfr and rl. One of these was named semang (sag; Chinese for color-blind) because it affects the development of a subset of photoreceptors in the eye. The other novel locus was referred to as Su[Su(Raf)1]IV. Two Src42A alleles were also isolated; however, they are not true suppressors because Su(Raf)1/Su(Raf)1 or Su(Raf)1/Df are lethal. Suppressor mutations that did not fall in any one of the above loci were designated as Su[Su(Raf)1] followed by an individualized number (see Table 2).
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The mapping and genetics of sag:
Deficiency chromosomes uncovering sag are not available. sag was mapped using a series of P(w+) insertions around polytene position 54B and was found to lie between two insertions l(2)k07110 (54B1-2) and l(2)k14517 (54B4-5) (![]()
The allele sag13L was derived from the Su[Su(Raf)1]13 chromosome that contained two recessive lethal mutations, one in the rl locus (referred to as rl13R) and another at the sag locus (referred to as sag13L). When separated by recombination, sag13L showed 100% of the suppressor activity; rl13R did not have any detectable suppressor activity. rl13R homozygotes are viable with rough eyes weaker than rl1 homozygotes (![]()
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The suppressor mutation rl41-1 failed to complement known rl mutations for viability. Flies carrying the rl41-1 chromosome over any sag allele showed a rough eye phenotype (see RESULTS) even though rl41-1/+ or sag/+ flies had normal eyes. To rule out the possibility that the chromosome carrying rl41-1 may also contain a sag allele, 38 crossover products (pr rl1 cn+ or pr+ rl41-1 cn) were generated from females of genotype pr rl1 cn/+ rl41-1 +. Because sag is located at 54B1-5, these crossover products should contain either rl41-1 or sag, but not both. These crossover products can be identified by eye colors and differences between rl1 and rl41-1. Flies of genotype rl1/Df(2R)MS210 are viable whereas those of rl41-1/Df(2R)MS210 are lethal. rl1 does not suppress Su(Raf)1, but rl41-1 does. By testing each crossover product for complementation with sag13L and suppression of Su(Raf)1, it was found that both the rl41-1-associated suppressor activity and rl1 map to 55.6 cM, a location very similar to the previously reported genetic position of rl. The locus responsible for the rough eye phenotype observed in rl41-1/sag flies cosegregated with the rl41-1-associated suppressor activity and no sag allele was present on the rl41-1 chromosome. Thus rl41-1 is an unusual rl allele. Chromosomes and mutations that are not described in the text can be found in ![]()
Scanning electron microscopy and plastic sections:
To prepare scanning electron microscopy (SEM) samples, flies (stored in 70% ethanol at 4°) were dehydrated in 80 and 95% ethanol for 1 hr each followed by two changes of 100% ethanol for 1 hr each. Flies were then incubated with a 1:1 mixture of 100% ethanol and hexamethyldisilazane (HMDS) for 15 min, followed by two changes of pure HMDS for 15 min each. The samples were poured onto filter paper in glass petri dishes and allowed to air dry under the hood for 2 hr before mounting onto SEM stubs for examination. Plastic sections of adult eyes were performed using procedures adopted from ![]()
Mosaic clones:
Mosaic females carrying sag mutant germline clones were induced by the FLP-DFS technique (![]()
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ies of genotype y w P(ry+; hs-FLP)12; P(ry+; hs-neo; FRT)42D sag/P(ry+; hs-neo; FRT)42D P(ry+; y+)44B. Yellow bristles were found at the wing margins in wings that were missing the L4 veins. The eye clones were induced in flies of genotype y w P(ry+; hs-FLP)12; P(ry+; hs-neo; FRT)42D sag/P(ry+; hs-neo; FRT)42D P(ry+; w+)47A. Small patches of unpigmented sag homozygous cells were found to form disorganized ommatidial arrays. No clones in the eye or wing were recovered in control experiments either without heat-shock treatment or with heat-shock treatment in the absence of P(ry+; hs-FLP)12.
Distinction between different genotypic classes of embryos:
To distinguish sag/sag from sibling sag/+ embryos derived from females carrying sag/sag germline clones, the mosaic females were crossed to males carrying sag over a balancer chromosome that contained a lacZ gene. The lacZ gene was fused to either a hunchback (hb) or an engrailed (en) promoter. Thus embryos that expressed the lacZ gene, as detected either by in situ hybridization or antibody staining, were sag/+ in genotype. Those that did not express the lacZ gene are sag/sag embryos. For antibody staining of eye imaginal discs, a sag/SM6-TM6B Tb stock was used, where SM6-TM6B is a balancer carrying Tubby (Tb). Tb causes shorter larvae and pupae, allowing sag/sag eye discs to be isolated from Tb+ larvae or pupae.
| RESULTS |
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The specificity of the genetic screen:
Our genetic screen was designed to isolate suppressor mutations of a Src42A allele Su(Raf)1 (MATERIALS AND METHODS). Su(Raf)1 suppresses the lethality of the X-linked RafC110 mutation. RafC110/Y; +/+ mutants normally die as late-stage pupae or a few hours following emergence. In the presence of one copy of Su(Raf)1, flies of genotype RafC110/Y; Su(Raf)1/+ survive and are fertile (![]()
Su(Raf)1 was used for the screen because it provided an intermediate level of suppression that was ideal for genetic modifying screens. RafC110/Y pharate adults have rough eyes with the R7 cells missing in 88% of the ommatidia. The rescued RafC110/Y; Su(Raf)1/+ flies still have rough eyes with the R7 cells missing in 36% of the ommatidia. Many genetic dosage-sensitive screens have been based on modification of the external appearance of the eye (![]()
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There was concern that using lethality as a genetic selection might run the risk of isolating any mutations that, as heterozygotes, decrease the general health of the organism. To test the effectiveness and the specificity of the screen, we tested many known signaling genes for suppression of Su(Raf)1 (Table 1). Our results show that the screen is highly selective for general components of the RTK pathway. Egfr, drk, and rl showed significant suppressor activities. A Ras1 deficiency did not suppress Su(Raf)1, but Ras1 point mutations did (see possible explanation in DISCUSSION; note that Dsor1 was not tested as it is on the same chromosome carrying RafC110). The Egfr ligand spitz (spi; ![]()
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The mutagenesis screen:
Thirty-six suppressors of Su(Raf)1 were isolated from a total of 20,000 mutagenized F1 flies (average frequency 0.18%). All the suppressors isolated were apparently recessive lethal and most of these fell into five complementation groups (Table 2). Multiple alleles for each of the five complementation groups were isolated and all showed high suppressor activities. Seven suppressor mutations did not fall into any of the five groups and were designated as Su[Su(Raf)1] followed by an individualized number (Table 2). Some suppressors in this category showed complex complementation patterns or very low suppressor activities. For example, Su[Su(Raf)1]2 complemented all alleles of sag except sag32-3. These single-hit mutations were not characterized further.
The classification of the suppressors of Su(Raf)1:
Eleven Su(Raf)1 suppressors failed to complement loss-of-function Egfr. All mutations of this group cause embryonic lethal phenotypes that are characteristic of loss-of-function Egfr, such as failure of germband retraction and narrowed ventral dentical bands (![]()
Six Su(Raf)1 suppressors failed to complement strong loss-of-function rl for viability. Transheterozygotes of any mutation in this group over the viable rl1 allele showed bent wings and rough eyes that are characteristic of the rl locus (![]()
Seven Su(Raf)1 suppressors belong to a novel locus named sag located at 54B1-5. Mutations in this group complemented all known RTK mutations on the second chromosome including phyllopod (phyl), which maps to a nearby location. These are most likely loss-of-function mutations (see MATERIALS AND METHODS). The two strongest alleles (sag13L and sag32-3) show a 100% suppression activity, i.e., no RafC110/Y; Su(Raf)1 +/+ sag13L males survive. Homozygotes or heteroallelic combinations of strong alleles die at late pupal stages. The gene sag+ appears to be expressed maternally. Removal of maternal sag+ product from the oocytes advances the lethality of homozygous mutants from the late pupal to embryonic stages. However, maternal sag+ function is fully replaceable by a paternal sag+ copy.
The fourth suppressor locus, Su[Su(Raf)1]IV, contained two alleles that caused a near complete suppression of Su(Raf)1. This locus may also be a novel signaling gene because it complemented all known RTK mutations on the second chromosome.
Two Src42A alleles, Src42A15-1 and Src42A18-2, were also isolated in the screens. These mutations are not true suppressors because Su(Raf)1 homozygotes and Su(Raf)1/Df hemizygotes are lethal. Like Su(Raf)1/Df hemizygotes, Src42A15-1 and Src42A18-2 homozygotes die as first instar larvae. The lethality associated with these two alleles was also rescued by Src42A cDNA under the control of the polyubiquitin promoter (Y. LI and X. LU, unpublished results).
Su(Raf)1 suppressors are not Su(Raf)1-specific:
We tested whether Su(Raf)1 suppressors also suppress two other strong suppressors of RafC110, Su(Raf)34B and Su(Raf)43B (Table 3). Su(Raf)34B encodes a partially activated fly Mek (![]()
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sag participates in embryonic processes controlled by several RTK pathways:
To provide evidence that the novel suppressor locus sag directly affects RTK signaling, we characterized the embryonic defects associated with sag/sag embryos derived from females carrying sag germline clones (GLC) crossed to sag/+ males. The sibling sag/+ embryos from the same cross are viable with no phenotypes. To distinguish these two classes of sibling embryos, second chromosome balancers carrying lacZ genes were used to mark the sag/+ embryos (see MATERIALS AND METHODS). The embryonic phenotypes described below were associated with sag/sag embryos derived from sag GLC eggs.
We focused on processes known to be controlled by RTKs. At the beginning of embryogenesis, the Tor RTK pathway specifies the embryonic terminal cell fates (![]()
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The expressions of tll and hkb at the posterior embryonic pole are solely activated by tor signaling, whereas the anterior expressions are also activated by the bicoid morphogene (![]()
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Several other RTKs function following the activation of Tor at the blastoderm stages. At the late embryonic stages examined, sag/sag embryos derived from sag GLC eggs lacked gut constrictions (compare Figure 3B with 3A). This feature was used in addition to the lacZ marker to confirm the genotype of sag/sag embryos (see MATERIALS AND METHODS).
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The DFGF-R1 RTK (breathless; ![]()
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The Egfr pathway is involved in specifying ventral ectodermal cell fates. Reduction of Egfr signaling causes deletion of the ventral-most cell types (![]()
sag is involved in Egfr RTK signaling during eye development:
RTK signaling mediates cell proliferation of imaginal discs. In strong sag zygotic mutants (sag13L or sag32-3) that die at pupal stage, eyes were rough and contained only ~50% of the normal number of ommatidia (Figure 4B). Third instar larval eye discs dissected from these mutants were also smaller in size (not shown), suggesting that sag may have a role in cell proliferation of the eye disc.
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The development of all cells in the eye requires a normal level of RTK signaling. ![]()
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To examine how sag affects the development of photoreceptor cells, anti-Elav antibody was used to visualize all photoreceptor neurons as they were recruited into the preommatidial cell clusters. In third instar sag mutant eye discs, the initial formation of the R8 cell appeared normal. Subsequently, more mature clusters contained reduced numbers of Elav-positive cells (compare Figure 5B with 5A). This defect was more easily seen in the mutant pupal eye disc where ommatidial spacing became more irregular, but no further loss of photoreceptor cells was observed (Figure 5D). These results indicate that some of the photoreceptor precursor cells failed to be recruited into the clusters at the third instar stage. Since preommatidial cluster formation requires several rounds of Egfr-mediated inductive recruitment (![]()
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In sag/+ flies carrying clones of sag/sag cells in somatic tissues, defects were found in only two tissues, the eye (described above) and wing. sag clones in the wing caused a deletion of the L4 vein (Figure 4G). This vein phenotype is similar to that observed in viable loss-of-function Egfr mutants (![]()
sag interacts genetically with Ras1, Raf, and rl:
To provide further evidence that sag has a role in RTK signaling, sag was tested for genetic interaction with other known signaling genes. First, sag dominantly enhanced the eye phenotype of weak rl mutants. In the eyes derived from rl1/rl13R flies, 65% of the ommatidia were normal and the remaining 35% of the ommatidia lacked the R7 cell, while outer photoreceptors were all normal (Figure 6A). In contrast, in the eyes derived from rl1 +/rl13L sag13L flies, all ommatidia lacked the R7 cell and 77% of these also lacked from one to three outer photoreceptor cells (Figure 6B). Second, although eyes from rl41-1/+ or sag13L/+ flies are normal (not shown), the eyes derived from rl41-1+/+ sag13L flies exhibited disorganized ommatidia (true for all sag alleles in Table 2; Figure 6C). Sections showed that only 41% of the ommatidia were normal and the remaining 59% of the ommatidia lacked the R7 cells and/or R16 cells (Figure 6D).
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Third, the expression of a constitutively activated form of Ras1 under the control of the sev promoter/enhancer sequences (sev-Ras1V12) mimics the effects of sev RTK activation (![]()
Fourth, RafHM7 mutants survive at 1822°, but die as pupae at 29° (![]()
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| DISCUSSION |
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RTK signaling regulates cell proliferation, cell fate determination, cell migration, and many other processes throughout Drosophila development (![]()
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The effectiveness and target genes of the genetic screen:
To examine the types of genes targeted by the screen, we tested many existing mutations in the RTK, Notch, and TGFß/Dpp pathways. Only the genes in the RTK pathway showed consistent suppression of Su(Raf)1. This suggests that the screen is highly selective for mutations involved in RTK signaling. Interestingly, the screen appears to detect mutations in genes throughout the entire pathway. For example, mutations acting both upstream of Raf (e.g., Egfr, spi, S) and downstream of Raf (e.g., rl) showed suppression activities. It appears that our screen should recover most RTK genes whose products are limited by gene dosage. For genes whose products are abundant in the cell, a >50% reduction of the gene activity may be needed to show a suppressive effect. These genes would be missed in our screen unless relatively rare dominant-negative mutations were induced. For example, hemizygosity at the Egfr or rl locus does not cause a complete suppression (~60% suppression activity). However, some EMS-induced Egfr and rl mutations isolated in the screen show a near 100% suppression (Table 2). In the case of Egfr, it is possible that a strong Egfr suppressor allele may produce mutant receptor molecules that form nonfunctional dimers with the wild-type Egfr molecules, thereby showing greater suppressive activity than a mere 50% reduction of the gene dosage. Because of our decision to keep strong suppressors, some mutations isolated, such as rl41-1, appear to be dominant-interfering alleles. Overall, the screen has high specificity and a broad range of gene targets.
Interpretation of the screen results:
Like the other five extragenic suppressors of RafC110, Su(Raf)1 not only suppresses RafC110 but also other partial loss-of-function Raf alleles that do not impair Ras-Raf binding. This suggests indirectly that the suppression of RafC110 by Su(Raf)1 does not involve the restoration of Ras-Raf binding. This would be consistent with Su(Raf)1 functioning downstream of a RTK on a branch pathway parallel to Ras1. If this were true, suppression of RafC110 by Su(Raf)1 would not require Ras1, but would still require a cell surface RTK such as Egfr.
On the basis of the above hypothesis, two types of genes could be mutated to cause the suppression of Su(Raf)1: (1) Genes that operate upstream of Su(Raf)1: ligand, receptor, and factors that feed into Su(Raf)1. Egfr, spi, and S fit in this class. Even though spi and S were not isolated in the screen, some spi and S alleles tested suppress Su(Raf)1 very well. (2) Genes that act downstream of Su(Raf)1 or genes that work together with Su(Raf)1 in contributing to the suppression of RafC110. rl, which encodes Drosophila Mapk, fits in this class. If Su(Raf)1 acts on a pathway parallel to Ras1, mutations in genes directly involved in activation of Ras1 would not cause suppression of Su(Raf)1. This could explain why Ras1 deficiency caused no suppression of Su(Raf)1 and why the Ras1 activator Sos is a very poor suppressor. However, certain Ras1 point mutations did cause significant degrees of suppression. This apparent contradiction could be because the Ras1 point mutant proteins somehow "clog up" the normal flow of signal in the pathway (i.e., a dominant interfering effect). An example of this was shown by ![]()
The role of sag in RTK signal transduction:
sag suppresses not only Su(Raf)1, but also Su(Raf)34B and Su(Raf)43B. Su(Raf)34B encodes a partially activated form of Mek. While it is not known what Su(Raf)43B encodes, Su(Raf)43B has been shown to upregulate signaling levels in both the sev and Egfr pathways during eye development and oogenesis, respectively (![]()
Phenotypic analyses of sag have provided evidence that sag has a role in RTK signaling. Zygotic sag mutants die at late pupal stage. However, removing both maternal and zygotic sag+ function results in embryonic lethality. These dead embryos showed terminal defects similar to that of the partial loss-of-function RafPB26 allele with reduced abdominal segment eight, anal pads, and associated structures (![]()
The role of sag during imaginal disc development was examined by inducing mitotic sag clones in adult structural primordia. Two obvious structural defects were observed in the wing and eye. First, the distal portion of the L4 wing vein was often missing. This phenotype is similar to that observed in weak Egfr mutants (![]()
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In the eye, sag mutant clones formed disorganized ommatidial arrays that contained reduced numbers of photoreceptors. Anti-Elav staining showed that two to three photoreceptor precursors failed to be recruited during preommatidial assembly at the third instar larval stage. This suggests that sag affects photoreceptor cell recruitment by reducing Egfr signaling. Mosaic analysis showed that sag is required in a cell autonomous fashion for the formation of the normal complement of photoreceptor cells. Furthermore, sag dominantly enhances the loss of the R7 cells in the viable rl1/rl13R flies, but suppresses the formation of supernumerary R7 cells caused by sev-Ras1V12. These results suggest that sag is likely involved in both Egfr and Sev RTK-mediated pathways of photoreceptor cell development. Overall, the phenotypes associated with sag mutations support the conclusion that sag+ is required in Tor, Fgfr, and Egfr RTK pathways.
Implication of Src42A in signal transduction:
Drosophila has two other Src family members, Src64 and Tec29, both of which are involved in ring canal development during oogenesis (![]()
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At this moment, we still do not know where Src42A and sag fit into the known RTK signaling cascade. Our unpublished results show that a Src42A cDNA driven by a ubiquitously expressing promoter rescues the lethality of both Su(Raf)1 homozygotes and Su(Raf)1/Df hemizygotes. Based on this, Su(Raf)1 has loss-of-function characteristics, suggesting that Src42A is, unexpectedly, a negative modulator of RTK signaling. On the other hand, the genetics of Su(Raf)1 suggest that the suppression of RafC110 may be attributed to a dominant-interfering effect because the RafC110 lethality was not suppressed in Src42A hemizygotes of genotype Df(2R)nap9/+ (see MATERIALS AND METHODS). Because of this, the role of Src42A in RTK signaling is still being investigated. However, the genetic interaction as revealed by the modifying screen suggests that Egfr and other RTKs may possibly regulate Src42A and sag, which in turn modulate the Mapk cascade.
| ACKNOWLEDGMENTS |
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We are grateful to the following people for their kind help: R. Kreber, D. Eberl, F. Karim, T. Schupbach, B. Dickson, E. Hafen, K. Matthew, T. Laverty, J. Rusconi, and V. Corbin for various fly stocks; G. Rubin for anti-Elav antibody. We also thank M. Melnick and D. Ruden for helpful comments on the manuscript and B. Culter at the University of Kansas for SEM operation. This work was supported by a research project grant (BE-263) from the American Cancer Society, a Basil O'Connor Starter Scholar Research Award (5-FY95-1132) from the March of Dimes Birth Defect Foundation, and a General Research Fund and an EPSCoR program from the University of Kansas to X.L.
Manuscript received June 5, 1998; Accepted for publication October 28, 1998.
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