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The Macromelanophore Locus and the Melanoma Oncogene Xmrk Are Separate Genetic Entities in the Genome of Xiphophorus
Silke Weisa and Manfred Schartlaa Department Physiologische Chemie I, Theodor Boveri-Institut, Biozentrum der Universität Würzburg, D-97074 Würzburg, Germany
Corresponding author: Manfred Schartl, Physiologische Chemie I, Biozentrum der Universität Würzburg, Am Hubland, D-97074 Würzburg, Germany., schartl{at}biozentrum.uni-wuerzburg.de (E-mail).
Communicating editor: C. KOZAK
| ABSTRACT |
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Fish of the genus Xiphophorus are polymorphic for black pigmentation patterns. Certain intra- or interspecific hybrids exhibit enhanced expression of these patterns, leading in many cases to malignant melanoma. Because no recombination was ever observed between the pattern information and the genetic predisposition to develop melanoma after hybridization, a "tumor gene" (Tu) was postulated that encodes both phenotypes. A dominant oncogene, ONC-Xmrk, was then found to be necessary and sufficient for the transforming function of Tu. Here we present molecular evidence that ONC-Xmrk and the pigment pattern information are encoded by separate, although intimately linked loci. No ONC-Xmrk gene was present in the 15 Xiphophorus strains investigated which exhibit no black pigmentation pattern. Five different patterns from Xiphophorus maculatus, X. evelynae, X. milleri, X. cortezi, and X. montezumae were associated with ONC-Xmrk and were melanomagenic, while fish of X. helleri, X. variatus, X. nezahualcoyotl, and X. montezumae with five other patterns had no ONC-Xmrk and consequently did not produce hybrid melanoma. These data provide evidence that ONC-Xmrk is sufficient for tumorigenesis in Xiphophorus hybrids, and that a separate, pigment pattern-encoding locus is closely linked to it.
MOST species of the genus Xiphophorus are polymorphic for a variety of pigment patterns due to local high density of melanophores, xantho/erythrophores, and guanophores. For the melanin-containing pigment cell lineage two types are distinguished, micro- and macromelanophores. Micromelanophores have a diameter up to 100 µm. They constitute a reticular pattern on the body and are dispersed on the fins, making up the greyish wild-type pigmentation of all fish of this group. In addition they concentrate in certain areas of the skin or the underlying extracutaneous tissues where they give rise to certain spot patterns. These are most prominent in the peduncular and tail fin compartment and have been designated "tail spot patterns." They are encoded by an autosomal multiple allelic series of codominant genes (![]()
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The Tu locus was found to encode an activated version of the growth factor receptor tyrosine kinase gene Xmrk (![]()
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From all data available to date, ONC-Xmrk appears to be sufficient for bringing about the Tu phenotype in hybrids, namely an increase in cells of the macromelanophore lineage. In accordance with earlier hypothesis it was proposed that ONC-Xmrk also functions in specifying the macromelanophore phenotype in the nontransformed state, e.g., in parental wild platyfish (![]()
| MATERIALS AND METHODS |
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Fish:
All fish used in this study (see Table 1) were bred and maintained in the aquarium facilities of the Biocenter under standard conditions (![]()
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For description of the pattern phenotype in wild fish see ![]()
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DNA analysis:
DNA was extracted from individual fish as described by ![]()
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| RESULTS |
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Although in the past extensive crossing studies in the genus Xiphophorus have been performed, our data base concerning the inheritance of macromelanophore (M) pattern under the aspect of melanoma formation in hybrids was still far from complete. Especially for some only recently described species and newly detected M patterns such information was totally lacking. We therefore hybridized M-pattern-exhibiting fish with M-pattern-free X. helleri, X. gordoni, or X. couchianus. These species have generally been found to give strong enhancement of various M patterns. For studying in hybrids the expression of the X. helleri Db2-pattern crossings were done with M-pattern-free X. helleri and X. andersi. We found that the M-pattern loci Sd, several alleles of Sp, Ni1, Ni2, and Sb of X. maculatus, Li of X. variatus, Sl of X. milleri, Ma of X. montezumae, and Se of X. evelynae are strongly enhanced in expression and give rise to severe melanosis and melanoma. Expression of Sr of X. maculatus was moderately enhanced, even after repeated backcrossing to X. helleri. Enhancement of Sc of X. cortezi and Cs of X. birchmanni occurred only in higher backcrosses. No enhancement or even reduction of the pattern was observed in hybrids with the Db2 pattern from X. helleri, the Ss pattern from X. nezahualcoyotl, and the Sf pattern of X. montezumae (Table 2). These data group the M patterns into three categories: those which can give rise to malignant melanoma in certain hybrids, those which are enhanced to a certain degree, but not to melanosis or melanoma, and those which are either unaffected, or even reduced. From the literature, Pu2 of X. variatus (![]()
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Fish from the species X. meyeri have dark spots on the body side that can merge to large patches. This pattern originates in the underlying extracutaneous compartment, mostly in the myoseptae, but associates to the dermis. The cells are intermediate in size between typical micromelanophores that make up the extracutaneous spot patterns of X. couchianus and X. gordoni, and the macromelanophores found so far in 10 of the remaining 19 species of the genus (![]()
To analyze fish from different species and populations either with or without an M pattern for the presence of ONC-Xmrk, an approach utilizing restriction length polymorphisms detected by Southern analysis was chosen. It was reasoned that the presence of ONC-Xmrk besides INV-Xmrk in the genome should be recognized as additional hybridizing fragments due to restriction site polymorphisms between both copies. Two independent hybridization probes were employed, one from the kinase domain encoding region (K-probe), the other from the carboxyterminal part (C-probe) of Xmrk. Both probes were kept as short as possible (K = 322 bp, C = 303 bp) to minimize the number of restriction fragments detected per copy. The assay was first tested on X. maculatus females which are homozygous for the X-chromosomal Xmrk oncogene of the Sd locus. Using 15 different restriction enzymes, in 6 cases with the K-probe and 10 with the C-probe, an additional band was detected. For comparison an X. maculatus strain was analyzed which has no macromelanophore locus and, consequently, has no melanoma oncogene. Here only the fragments of the proto-oncogene were seen. Another X. maculatus strain which carries the M-pattern locus Ni1 that leads to highly malignant melanoma in hybrids with X. helleri gave similar results with a total of three restriction enzymes for K and nine for C being informative by generating additional fragments (Table 3). In general, for those restriction fragments for which information from the cloned genomic loci of the proto-oncogene and the oncogene is available from X. maculatus, the predicted size was noted.
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Comparing M-pattern-bearing fish with the corresponding animals that have no macromelanophores, additional Xmrk fragments were obtained for X. cortezi Sc, X. montezumae Ma (see Figure 1), and X. milleri Sl. For X. evelynae Se, no corresponding strain without M pattern was available, however, with two enzymes for the K-probe and nine for the C-probe, two hybridizing fragments indicate the presence of an additional Xmrk copy. On the contrary, for the M patterns Db1 and Db2 of X. helleri (Rio Sontecomapan and Rio Lancetilla strains), Ss of X. nezahualcoyotl, Pu1 of X. variatus, and Sf of X. montezumae no additional bands were found if compared to the restriction fragment pattern of the corresponding M-pattern-free fish (Table 3 and Table 4).
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The Cs pattern of X. birchmanni was tested for cosegregation with an additional 6.5-kb HindIII fragment that is absent in macromelanophore-free individuals. 34 Cs-expressing backcross hybrids with X. helleri (strain no. 29, BC1 and BC2) had also inherited this diagnostic fragment, while 35 siblings without Cs had no additional Xmrk band. No recombinants were seen in this analysis.
To obtain further evidence for the homology of the Cs-pattern-associated additional Xmrk copy of X. birchmanni with the ONC-Xmrk of X. maculatus, a PCR analysis was done with primers derived from the 5' (promoter) and 3' (exon 1) flanking region of the chromosomal breakpoint in ONC-Xmrk. Such primers give rise to an amplification product only from ONC-Xmrk but not from INV-Xmrk. Cloning and sequencing confirmed the homology of the Cs-associated Xmrk copy of X. birchmanni with ONC-Xmrk from X. maculatus. Similarly, breakpoint-spanning homologous products were obtained from X. evelynae with Se and X. milleri with Sl (Figure 2).
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Spotted X. meyeri were not distinguishable from unspotted fish by additional fragments, excluding a second copy of Xmrk in these fish. X. helleri (Laguna Catemaco), X. variatus (Rio Vinazco), X. gordoni, and X. couchianus, all of which have no macromelanophores, showed a simple hybridization pattern with generally a single band per enzyme. This, as expected, indicates only presence of INV-Xmrk. In some cases an interindividual population-specific polymorphism for fragment length was seen with certain enzymes leading in heterozygotes to two hybridizing bands. However, single bands in the homozygotes easily distinguished this from the true additional band situation of fish which have the extra oncogenic Xmrk copy. Such polymorphisms were especially evident in the X. helleri stocks from the Rio Sontecomapan and in X. nezahualcoyotl where up to five alleles could be detected. Sex-chromosome-specific restriction fragment length polymorphisms (RFLPs) for INV-Xmrk were detected in X. variatus (Rio Vinazco strain) with AccI (K- and C-probe) and BamHI (C-probe), in X. helleri (Rio Sontecomapan strain) with XbaI (K-probe), X. andersi with DraI (K-probe), and X. evelynae (SstI, C-probe). Here double bands were restricted to the heterogametic sex, the males (Table 3).
| DISCUSSION |
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In this study additional restriction fragments have been used to score for the presence of ONC-Xmrk as an additional gene copy in the genome of the fish. This assay was tested for fidelity in X. maculatus, where through extended molecular analysis including the cloning of the entire proto-oncogene and oncogene genomic loci the organization of the different Xmrk copies is known in detail and complete restriction maps are available (![]()
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All patterns that readily produce melanoma in hybrids (class I) were found to be associated with an additional, oncogenic Xmrk, while those that are unaltered or reduced (class III) have no extra Xmrk copy. For the intermediate class II (patterns which are enhanced, but not melanomagenic) from the Sr-pattern-encoding Y chromosome of X. maculatus an oncogenic copy of Xmrk has been cloned (![]()
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In conclusion, our data show that all macromelanophore pattern loci that can be enhanced in expression after hybridization, frequently even up to the malignant state, are associated with ONC-Xmrk, while those that remain unaltered or are reduced in expression after hybridization are not (Table 4). This is supported by the comparative Xmrk RFLP analysis of an X. helleri strain polymorphic for Db2 (![]()
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The fact that several macromelanophore loci (Db1, Db2, Ss, Pu1, Sf) exist, which are not associated with an additional oncogenic copy of Xmrk (Table 4), can most likely be interpreted by the reasoning that the Xmrk oncogene is not Mdl or, in the classical genetic terms, that Tu is not the macromelanophore gene. The fact that all M-pattern loci that are enhanced or even tumorigenic after the appropriate crossings are indeed associated with a second Xmrk copy lends further support to the extrapolation of the unambiguous data from X. maculatus that the Xmrk oncogene is the melanoma oncogene of the whole genus Xiphophorus and that the different alleles from the various species are homologous (![]()
In the current absence of further molecular data it cannot be excluded as an alternative hypothesis that the macromelanophore patterns are not being coded for by alleles at a single locus, Mdl, but that perhaps there are two distinct loci, one for the tumorigenic patterns (class I and II), which is associated with the extra Xmrk copy ("Mdl-1"), and the other for the class III pattern, not containing an extra sequence ("Mdl-2"). The perfect similarity of some class I, II, and III pattern phenotypes in the nonhybrid wild fish would argue against structurally very divergent "Mdl-1" and "Mdl-2" loci; however, in the absence of recombinants among patterns (which might be too rare to observe or due to the lack of any way to predict recombinant phenotypes), this issue cannot be clarified at present.
It appears appropriate to adjust the genetic nomenclature for the pigment pattern and melanoma genes on the basis of the findings that the tumor gene is not equivalent to the macromelanophore gene. The Tu locus sensu Anders consists of two different loci, namely of one allele of Mdl and one closely linked allele of ONC-Xmrk. The different phenotypes of the macromelanophore pattern are ascribed to Mdl as different alleles, because also in those cases where an Mdl is not linked to an ONC-Xmrk gene different patterns can be clearly recognized (e.g., Db1 and Db2). Consequently Tu-Sd is now designated MdlSd-Xmrk. The locus encoding the pattern Dabbed-2 of X. helleri that neither contains an ONC-Xmrk gene nor gives rise to crossing conditioned pattern enhancement, melanosis, or melanoma, is encoded by MdlDb2. Here the earlier used denomination Tu-Db2 would be especially misleading. We reserve the acronym Tu as a designation for the Mdl-Xmrk compound locus.
Although the argument that ONC-Xmrk oncogene is not Mdl is supported by our data as presented in Table 3, this makes it difficult to explain the phenotype of a loss-of-function mutant (lof-1) of the spotted dorsal locus. Fish with the wild-type MdlSd-Xmrk locus give rise to hybrid offspring, e.g., with X. helleri as the recurrent parent for backcrossing, which develop malignant melanoma originating in the Sd compartment. The MdlSd-Xmrk loss-of-function mutant lof-1 carries an insertion in ONC-Xmrk which disrupts the reading frame (![]()
If the presence of either Mdl or ONC-Xmrk are plotted as characters on the DNA sequence based phylogenetic tree of the genus Xiphophorus (![]()
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It has been shown that a broad spectrum of pigmentation phenotypes is obtained for one and the same Mdl and Xmrk allele depending on the host species or even population. M-pattern-carrying chromosomes may cause malignant melanoma even in F1 with one species, but might be totally suppressed after hybridization with another species or population (![]()
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| ACKNOWLEDGMENTS |
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We thank U. HORNUNG and B. WILDE for technical assistance, G. SCHNEIDER, H. SCHWIND, and P. WEBER for breeding and maintaining of the fish, and C. MÖLLER for help in preparing the manuscript. This work was supported by grants to M.S. supplied by the Deutsche Forschungsgemeinschaft through Sonderforschungsbereiche 465, 172, and 165, the European Commission (contract no. CI1*-CT94-0021), and the Fonds der Chemischen Industrie.
Manuscript received January 28, 1998; Accepted for publication May 1, 1998.
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, presence of the character;
, absence of the character. In B for several taxa the information is incomplete (no square). It is assumed that all those species which do not have macromelanophore pattern also lack the ONC-Xmrk, as an extrapolation of the existing data set (see text).
