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Molecular Genetic Dissection of Mouse Unconventional Myosin-VA: Tail Region Mutations
Jian-Dong Huanga, Valerie Mermallb, Marjorie C. Strobela, Liane B. Russelle, Mark S. Moosekerb,c,d, Neal G. Copelanda, and Nancy A. Jenkinsaa ABL-Basic Research Program, NCI-Frederick Cancer Research and Development Center, Frederick, Maryland 21702,
b Department of Biology, Yale University, New Haven, Connecticut 06520
c Department of Pathology, Yale University, New Haven, Connecticut 06520
d Department of Cell Biology, Yale University, New Haven, Connecticut 06520
e Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831
Corresponding author: Nancy A. Jenkins, ABL-Basic Research Program, P.O. Box B, Bldg. 539, Frederick, MD 21702-1201, jenkins{at}ncifcrf.gov (E-mail).
Communicating Editor: C. KOZAK
| ABSTRACT |
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We used an RT-PCR-based sequencing approach to identify the mutations responsible for 17 viable dilute alleles, a mouse-coat-color locus encoding unconventional myosin-VA. Ten of the mutations mapped to the MyoVA tail and are reported here. These mutations represent the first extensive collection of tail mutations reported for any unconventional mammalian myosin. They identify sequences important for tail function and identify domains potentially involved in cargo binding and/or proper folding of the MyoVA tail. Our results also provide support for the notion that different myosin tail isoforms produced by alternative splicing encode important cell-type-specific functions.
ONE of the best-studied classes of unconventional myosins is myosin-V (MyoV). MyoV is evolutionarily well conserved and Myo5-related genes have been identified in multiple different organisms (![]()
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Studies in both yeast and vertebrates have been very informative with respect to the function of MyoV family members. The yeast MYO2 gene was identified in a screen for temperature-sensitive cell division cycle mutations and is essential for cell survival ( ![]()
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MYO4 is important for mating-type switching in yeast ( ![]()
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In the mouse, MyoVA is encoded by the dilute locus (![]()
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In an accompanying manuscript (![]()
| MATERIALS AND METHODS |
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Mice:
Seven of the alleles reported in this study were generated by mutagenesis of (101/Rl x C3H/Rl) F1 hybrid mice, six at the Oak Ridge National Laboratory, Oak Ridge, TN (Myo5a34DENUg, Myo5a2ENUR, Myo5a5ENURg, Myo5a6PXENURg, Myo5a34ENURg, and Myo5a33ENURf ) and one at the Medical Research Council Radiobiology Unit, Harwell, UK (Myo5ad-105H). The remaining mutations arose spontaneously at The Jackson Laboratory, Bar Harbor, ME. The chromosomes of origin for these spontaneous alleles are as follows: C57BL/6J, Myo5ad-J; C57BL/10SnJ, Myo5ad-n; and C57BL/6J, Myo5ad-n2J. Two mutations, Myo5a2ENUR and Myo5a33ENURf, are extinct and all analyses were performed on frozen tissues. The remaining eight mutations are maintained at the National Cancer Institute-Frederick Cancer Research and Development Center, Frederick, MD. With the exception of Myo5ad-n2J, all mutations are propagated in the homozygous condition. Myo5ad-n2J mice are maintained by crossing carriers to C57BL/6J-d v se/d v se mice.
Northern analysis, protein analysis, and RT-PCR sequencing were done as described in ![]()
| RESULTS |
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We have used an RT-PCR-based sequencing approach to identify the mutations responsible for 17 viable dilute mutations that vary in their effect on coat color and the nervous system. Seven of the mutations mapped to the MyoVA head and are reported in an accompanying manuscript (![]()
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Among the 10 tail mutations, seven affect only coat color: one is a d mutation, which when homozygous results in a lightened coat, and six are dx mutations, which when homozygous cause a coat color intermediate in phenotype between wild-type and d mice. The remaining three mutations, which are designated dn, cause a lightened coat (similar to d) and have a neurological disorder of varying severity (Table 1). No dxn mutations, that is, dx in color in combination with a neurological disorder, were identified in the tail. This was surprising given that three of seven head region mutations were from the dxn class (![]()
Five of the tail mutations were induced by ethylnitrosourea (ENU) (Myo5a5ENURg, Myo5a34DENUg, Myo5a2ENUR, Myo5a34ENURg, and Myo5a33ENURf ) (Table 1). The vast majority of germline ENU-induced mutations characterized to date are caused by A:T to G:C transitions (50%) or A:T to T:A transversions (36%) (reviewed in ![]()
The five other mutations mapping to the tail are either spontaneous (three), X-ray-induced (one), or induced by a combination of X-irradiation and ENU mutagenesis (one) (Table 1). The three spontaneous mutations, Myo5ad-J, Myo5ad-n, Myo5ad-n2J, were caused by a genomic deletion, a missense mutation, or a splicing mutation, respectively (Table 1). All three types of lesions have been commonly associated with spontaneous mouse germline mutations (summarized in ![]()
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MyoVA mRNA and protein expression levels:
To determine if any of the tail mutations affected Myo5a mRNA expression levels, brain RNA from each of the 10 mutations was characterized by Northern analysis (Figure 2) and Myo5a mRNA levels were quantitated relative to a wild-type control (Table 1). Myo5a mRNA levels were as follows: not significantly altered by five mutations, Myo5ad-105H, Myo5a2ENUR, Myo5a6PXENUe, Myo5a33ENURf and Myo5ad-n; moderately reduced by three mutations, Myo5a5ENURg, Myo5a34DENUg, and Myo5a34ENURg; and severely reduced by two mutations, Myo5ad-J and Myo5ad-n2J.
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To determine if any of the mutations affected MyoVA protein levels, extracts from mutant brain were characterized by Western analysis using antibodies directed against the MyoVA head (Figure 3) and the levels quantitated relative to an internal MyoVI control (Table 1). Protein levels were severely reduced by seven mutations, Myo5a5ENURg, Myo5a34DENUg, Myo5a6PXENUe, Myo5ad-J, Myo5a33ENURf, Myo5ad-n, and Myo5ad-n2J, and moderately reduced by two others, Myo5ad-105H and Myo5a34ENURg. Similar to what was seen for the head region mutations (![]()
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Mutations in the coiled-coil domain of the tail:
Two of the Myo5a mutations, Myo5ad-J and Myo5a34DENUg, mapped to the coiled-coil domain of the tail that is involved in protein dimerization (Figure 1). The Myo5ad-J mutation is unique in these studies in that Myo5ad-J animals display the full mutant phenotype in the coat but are neurologically normal (Table 1). A combination of RNA and genomic sequence analysis indicated that the Myo5ad-J mutation results from an ~1-kb genomic deletion that removes 8 bp of coding sequence from the first coiled-coil domain (Figure 4A). Because a splice acceptor site is removed by the deletion, no wild-type Myo5a transcripts are expressed in Myo5ad-J mice. Three mutant splicing products, however, were detected following RT-PCR amplification and cloning of Myo5ad-J brain mRNA. These transcripts were generated using cryptic splice acceptor sites located in both intron as well as exon sequence (Figure 4A). Two of these mutant transcripts, the 12-bp deletion and the 114-bp deletion, are in frame. Because Myo5ad-J mice are neurologically normal it would appear that at least one of these mutant proteins is functional in brain.
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The Myo5a34DENUg mutation results from a T3672A transversion that introduces an L1211Q substitution into the second coiled-coil domain (Table 1, Figure 1). Computer analysis using MacVector 6.0.1, Protein Analysis Toolbox, indicates that the coiled-coil structure is not disrupted by this substitution, which is consistent with the mild dx phenotype caused by this allele. However, this mutation does appear to destabilize the protein and possibly the mRNA as well (Table 1).
Mutations in other regions of the tail:
Tissue-specific splicing mutations:
Three alternative splice forms of the MyoVA tail can be identified by PCR amplification and agarose gel electrophoresis (Figure 5). Splice form #3 is unique to brain. Splice forms #1 and #2 are seen in most other tissues, although their relative expression levels vary from tissue to tissue. Two mutations, Myo5ad-105H and Myo5a2ENUR, map to this alternatively spliced region and specifically affect splice form #1. The Myo5ad-105H mutation results from a G to T transversion in exon F (Figure 4B). As a result of this mutation exon F is skipped and splice form #1 is not expressed (Figure 5). Neither splice form #2 nor #3 is affected by the exon F mutation (Figure 5). A number of investigators have reported that exon sequence is important for splicing (![]()
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The Myo5a2ENUR mutation results from an A to G transition in the splice acceptor site for exon F (Figure 4C). Again, exon F is skipped and neither splice form #2 nor #3 is affected (Figure 5). This A residue is 100% conserved in all reported 3' splice junctions (![]()
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Although all cells contain a cytoskeleton, the cytoskeleton performs different roles and contains different components in different cell types. Tissue-specific alternative splicing is one way that a single cytoskeletal gene can produce many different proteins that perform different functions in different cell types. In the case of MyoVA, we have proposed that exon F might encode sequences necessary for MyoVA function in cells such as melanocytes and that exon B encodes sequences important for MyoVA function in the nervous system (![]()
Non-tissue-specific splicing mutations: Two additional splicing mutations, Myo5a34ENURg and Myo5ad-n2J, were localized to the MyoVA tail (Figure 1). Neither mutation is tissue-specific: all forms of the protein are equally affected by these two mutations. Two classes of Myo5a transcripts are expressed in Myo5a34ENURg mice. One class is wild type and the other class contains a 151-bp out-of-frame deletion (Figure 4D). Genomic sequence analysis showed that the 151-bp deletion results from exon skipping because of a T to C transition in the polyprimidine tract located upstream of the skipped exon (Figure 4D). As expected from the subtle nature of this mutation, as much as 80% of the Myo5a mRNA expressed in Myo5a34ENURg mice is normally spliced. No truncated protein was detected by Western analysis (Figure 3) and wild-type protein was made at ~25% normal levels (Table 1). These results are consistent with the subtle dx phenotype of Myo5a34ENURg mice.
Myo5ad-n2J is the most severe neurological mutation localized to the tail region. Like dl mice, these mice are neurologically impaired by 1421 days after birth. However, instead of dying from these neurological defects as mice homozygous for the dl alleles do, mice homozygous for Myo5ad-n2J show some improvement as they age and can be kept alive for extended periods of time. Northern and Western blot analysis showed only 12% of the normal Myo5a RNA level and <1% of the normal MyoVA protein level in Myo5ad-n2J brain (Table 1, Figure 2 and Figure 3). Four abnormal classes of Myo5a transcripts were detected in Myo5ad-n2J brain (Figure 4E). Two classes carried deletions and two carried insertions relative to wild-type transcripts. Genomic sequence analysis indicated that these abnormal transcripts resulted from a G to T transversion in a conserved GT splice donor consensus sequence (Figure 4E). Because the G is absolutely conserved in all GT splice donor consensus sequences, it is not surprising that wild-type Myo5a transcripts are not detected in these mice. Only two of the abnormal splices are in-frame, the 54-bp insertion and the 276-bp deletion. Although both transcripts could theoretically encode functional protein, it seems unlikely that a protein with a 92 amino acid deletion in the tail region would be functional. Presumably, however, at least one of the proteins must retain some function as homozygous Myo5ad-n2J mice are viable.
Clustered missense mutations: Three of the globular tail region mutations were missense mutations (Table 1). Interestingly, all three mutations are located within 10 amino acids of each other (Figure 1, Table 1). Myo5a33ENURf results from an I1510N substitution; Myo5a5ENURg, a M1513K substitution; and Myo5a6PXENUe, a D1519G substitution. None of the mutations significantly affect Myo5a mRNA levels, but all produce fairly dramatic reductions in MyoVA protein levels (24% wild-type levels) (Table 1). However, these reduced protein levels do not correlate well with the severity of the phenotypes. As mentioned previously, the Myo5a5ENURg mutation produces a very subtle change in color yet makes only 2% wild-type protein. Both Myo5a6PXENURg and Myo5a33ENURf produce 4% wild-type protein but Myo5a33ENURf has a much more severe effect on pigmentation than the other two alleles, and it also affects the nervous system (Table 1).
A protein truncation mutation:
The Myo5ad-n mutation results from a C5558T transition that introduces a stop codon at residue 1840 of the protein (Figure 1, Table 1). Fourteen amino acid residues are deleted from the end of the mature MyoVA protein by this mutation. Myo5a mRNA levels are not significantly affected in Myo5ad-n mice (91%); however, MyoVA protein levels are dramatically reduced (<1%) (Table 1). Myo5ad-n is similar to the Myo5a33ENURf mutation with respect to both color and neurological abnormalities. At 1421 days after birth the mutant animals are as neurologically impaired as dl mice. However, as they age they recover completely and as adults are neurologically normal. A number of explanations could account for this phenotype in Myo5ad-n mice. For example, the 14 amino acids deleted by this mutation could encode residues important for MyoVA function in young animals but not in the adult, at least with respect to the nervous system. Alternatively, the phenotype of Myo5ad-n mice may be explained by the very low MyoVA protein levels (<1%) seen in Myo5ad-n mice. Perhaps higher MyoVA protein levels are required within the first few weeks after birth when the nervous system is still developing as compared to older animals, in which the nervous system is fully developed.
| DISCUSSION |
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In studies reported here we describe 10 mutations that map to the coiled-coil or globular domains of the tail region of unconventional mouse MyoVA. These mutations represent the first extensive collection of tail region mutations described for any unconventional myosin. Although a large number of mutations have been reported for another unconventional myosin, Myo7a/MYO7A (![]()
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-helical domain, which is predicted to be involved in MYOVIIA dimerization.
Four of the 10 tail mutations were splicing mutations, five were missense mutations, and one resulted from an ~1-kb intragenic deletion. These results contrast with those for the head region mutations where all seven were missense mutations (![]()
The Myo5a head mutations were roughly equally distributed along the length of the MyoVA head, and there was not obvious clustering of mutations with respect to phenotypic class, suggesting a simple model where the least severe amino acid changes correlate with the least severe dilute alleles (dx), and the most severe are dxn or dn (![]()
The results for several tail region mutations suggest that the nervous system is relatively insensitive to the level of MyoVA protein. For example, mice homozygous for the Myo5ad-J mutation show a fully diluted coat color but are neurologically normal at all ages. The mutation is caused by a ~1-kb genomic deletion in the coiled-coil region, which decreases the level of protein in brain to <1% of that found in normal mice. Furthermore, none of the protein is wild type. Assuming that the region encompassed by the deletion is necessary for both melanocyte and neuron function, then a remarkably small amount of MyoVA is sufficient to rescue neurological phenotype. Furthermore, a nonsense mutation in Myo5ad-n mice results in the production of a 14 amino acid C-terminal truncated protein that is expressed at <1% of the level of that found in wild-type brain. Although Myo5ad-n mice are neurologically impaired when young, as adults they are normal and even breed in the homozygous condition.
Studies in both the dilute rat and the dilute mouse suggest that MyoVA is necessary for the transport of smooth endoplasmic reticulum (SER) to the dendritic spines of cerebellar Purkinje cells (![]()
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Two of the most informative tail region mutations were Myo5ad-105H and Myo5a2ENUR. Both are tissue-specific splicing mutations that delete one of the three MyoVA splice forms. The splice form that is missing contains exon F, which is expressed in tissues such as spleen and skin but not in brain. This pattern of expression suggests that exon F might encode sequences that allow MyoVA to carry different cargoes in tissues such as skin (melanocytes) and spleen versus brain (Purkinje cells). Consistent with this model, Myo5ad-105H and Myo5a2ENUR mice are neurologically normal: only the coat color is mildly affected by these two mutations. In the future it will be interesting to perform yeast two-hybrid screens using tails as baits that either contain or lack exon F. Perhaps it will be possible to identify proteins expressed in tissues such as melanocytes that only bind baits carrying exon F.
Another region that may function in cargo binding is suggested by three mutations that cluster within 10 amino acids in the MyoVA tail, Myo5a33ENURf, Myo5a5ENURg, and Myo5a6PXENUe. This clustering is not expected by random chance (P < 1.6 x 10-7), suggesting that an important functional domain of Myo5a may be located in this region of the tail. Interestingly, this 10 amino acid region is located 8 amino acids upstream from an ~280 amino acid C-terminal region that shares extensive sequence homology with two genes, AF-6 and cno (![]()
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An alternative explanation for this clustering of mutations is that this region of the tail is important for protein folding. Consistent with this explanation, computer analysis (MacVector 6.0.1; Protein Analaysis Toolbox) predicts that all three mutations are not surface exposed and two of the mutations, Myo5a33ENURf and Myo5a5ENURg, are located in hydrophobic regions. The third mutation, Myo5a6PXENUe, is predicted to be located at the border between a hydrophobic and hydrophilic region. In addition, all three mutations are predicted to increase the hydrophilicity of the protein. An effect on protein folding could also account for the protein instability that results from these three mutations.
Finally, recent studies have identified mutations in MYOVA in humans with Griscelli disease (![]()
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Two MYOVA mutations have been identified in Griscelli patients (![]()
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| ACKNOWLEDGMENTS |
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We thank JO PETERS and BRUCE CATTANACH (MRC Radiobiology Unit, Harwell, UK) for providing mice carrying the Myo5ad -105H allele and LINDA WASHBURN and HOPE SWEET (The Jackson Laboratory, Bar Harbor, ME) for providing mice carrying the Myo5ad -J, Myo5ad -n, and Myo5ad -n2J alleles. We are grateful to DEBORAH A. SWING and MARILYN POWERS for their help with these studies. This research was supported by the National Cancer Institute, Department of Health and Human Services, under contract with ABL (N.G.C. and N.A.J.); a basic research grant from the Muscular Dystrophy Association and National Institutes of Health grant DK-25387 (M.S.M.); American Cancer Society postdoctoral fellowship PF-4316 to V.M.; and the Office of Health and Environmental Research, U.S. Department of Energy (under contract DE-AC05-96OR22464 with Lockheed Martin Energy Research Corp.) jointly with the National Institute of Environmental Health Sciences under Interagency Agreement No. 1-Y 01-ES-50318-00.
Manuscript received September 19, 1997; Accepted for publication December 23, 1997.
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