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The Transmission of Fragmented Chromosomes in Drosophila melanogaster
Kami Ahmada and Kent G. Golicaa Department of Biology, University of Utah, Salt Lake City, Utah 84112
Corresponding author: Kent G. Golic, 201 Biology Bldg., Department of Biology, University of Utah, Salt Lake City, UT 84112, golic{at}bioscience.utah.edu (E-mail).
Communicating editor: R. S. HAWLEY
| ABSTRACT |
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We investigated the fate of dicentric chromosomes in the mitotic divisions of Drosophila melanogaster. We constructed chromosomes that were not required for viability and that carried P elements with inverted repeats of the target sites (FRTs) for the FLP site-specific recombinase. FLP-mediated unequal sister-chromatid exchange between inverted FRTs produced dicentric chromosomes at a high rate. The fate of the dicentric chromosome was evaluated in the mitotic cells of the male germline. We found that dicentric chromosomes break in mitosis, and the broken fragments can be transmitted. Some of these chromosome fragments exhibit dominant semilethality. Nonlethal fragments were broken at many sites along the chromosome, but the semilethal fragments were all broken near the original site of sister-chromatid fusion, and retained P element sequences near their termini. We discuss the implications of the recovery and behavior of broken chromosomes for checkpoints that detect double-strand break damage and the functions of telomeres in Drosophila.
IN most eukaryotes a chromosome must consist of a single molecule of double-stranded DNA, with a single functional centromere and two telomeres, in order to be stably transmitted. The behavior of dicentric chromosomes during cell division has been extensively examined in maize, Saccharomyces, and Drosophila. In maize, a dicentric chromosomeproduced by meiotic recombination between a paracentric inversion and its normal homologbreaks during anaphase I and a chromosome fragment is delivered to each daughter cell (![]()
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Whether chromosome breakage or loss occurs after dicentric formation is a key issue, because these may have different cellular consequences. ![]()
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Recently, a number of groups have recovered the broken chromosomes that MULLER looked for. ![]()
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The mechanisms of broken chromosome healing have been extensively characterized in Saccharomyces cerevisiae (![]()
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Eucaryotes with linear chromosomes normally have special DNA sequences that confer the properties of a telomere. In most organisms these are short G- and T-rich sequences that are repeated many times (GT repeats; ![]()
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Most broken chromosomes that have been isolated in Drosophila do not have HeT or TART sequences on their ends (![]()
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In this article we describe our studies of the behavior of dicentric chromosomes and broken chromosomes in Drosophila. ![]()
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| MATERIALS AND METHODS |
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Mutations and chromosomes not described here are described by ![]()
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P element lines:
Transformation of flies with each P element construct was carried out by standard procedures (![]()
2-3, ry+](99B) (![]()
The FLP construct P[ry+, hsFLP] has been described by ![]()
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pP[RS5] carries two FRTs in direct relative orientation and a whs selectable marker (![]()
Construction and identification of chromosomes bearing inverted-orientation FRTs:
Duplications of a whs-bearing P element can be recovered by screening for darker eye colors after mobilization with P transposase (![]()
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To construct a Y chromosome that carried inverted FRT-bearing P-element insertions, we used Dp(4;Y)E spaCat as a Y chromosome with euchromatic sequences attached, into which P elements may insert. [This chromosome is probably the same as Dp(4;Y) in ![]()
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2-3 ry+](99B)/+; P[RS5]1B/+ males to w1118 virgins and recovering Sb+ male progeny with eye colors distinct from that of P[RS5]. These males were crossed to w1118 virgins to test for sex linkage. One line (P[RS5]W1) out of 98 tested was identified as an insertion on Dp(4;Y)E, spaCat. This insertion exhibits variegated expression of whs.
The insertion P[RS5]W1 was mobilized by P[
2-3, ry+] (99B) and flies with darker eyes were recovered. Genomic DNA from each line was screened by PCR with the Pfoot primer (Table 2) to identify lines with two close insertions, and rescreened with either the primer Pout5' or the primer Pout3' to identify insertions in inverted relative orientation. The line P[RS5]ZY 2 had two P elements 0.7 kb apart with adjacent 3' ends, and is referred to as DcY (Figure 2).
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DcY was used to generate an X-Y rearrangement that placed the P[RS5]ZY 2 double insertion on the right arm of the X chromosome. w1118/DcY males were X-irradiated with 800 rads in a Torrex 120D machine and brooded with w1118 virgins daily. Progeny from the broods of days six through nine were screened for w+ females and seven such females were retested for linkage of whs to the X chromosome. The line d7 was identified as an X-Y exchange that placed YL (and the chromosome 4 duplication) as a right arm of the X. The structure of this chromosome was confirmed by mitotic cytology. We refer to this chromosome as X·DcYL. The y+·DcIV, DcY and X·DcYL chromosomes are diagrammed in Figure 2.
Broken chromosome lines:
We established lines from numerous male progeny carrying derivatives of the DcY, X·DcYL, and y+·DcIV chromosomes. Only those derivatives of DcY that carried all the Y fertility factors were propagated, because they were maintained in males as the only Y chromosome. Chromosomes derived from X·DcYL were recovered in males that also had a Y chromosome (alleviating the requirement for the Y fertility factors of the fragment chromosome) and were balanced with C(1)DX.
Chromosomes derived from y+·DcIV could not be balanced by standard procedures. These chromosomes were recovered in males that also carried a C(4)RM, spapol chromosome and were crossed to females carrying this compound chromosome to expand lines. We attempted to balance the derivative chromosomes by crossing in a chromosome 4 marked with ciD. However, progeny that carried the derivative chromosome and ciD proved to also carry C(4), and a balanced stock could not be established. These crosses indicated that the lines were accumulating additional copies of chromosome 4, which is not uncommon in stocks that carry mutations on chromosome 4. Because of the multiple fourth chromosomes segregating in these lines, we used the pch+ marker on Dp(1;4)193 to select for the chromosome. pch2 males do not survive unless they carry Dp(1;4)193 (on the chromosome derived from y+·DcIV). The duplication does not rescue viability in pch2 females, presumably because the pch+ gene on the duplication variegates.
PCR amplification from Drosophila genomic DNA:
Genomic DNA was prepared from adults as described by H. STELLER (personal communication) or by W. R. ENGELS (personal communication) for PCR tests. The primers used in these tests are listed in Table 2 and were used in the following combinations: PE5 + BSF1; BSF2 + w7703D; w7926U + PE3; and Pout3' + Pout3'. The four amplified products span the FLP-excised derivative of P[RS5] and the interval between them in DcY. The distance between P elements in the y+·DcIV chromosome was too great for PCR amplification; thus the test between the P elements could not be performed. All samples of genomic DNA were tested with the primer pair w11678U/w10683D, which amplifies a 1-kb product from the endogenous white gene, to confirm that they contained amplifiable DNA.
P transposase-induced terminal deficiencies:
To generate a terminal deficiency on chromosome 4, we crossed Sb P[
2-3, ry+](99B)/+; P[RS5]1B/+ males to y w; Dp(1;4)193, y+·spapol virgins and screened the progeny for Sb+ spa flies. To generate a terminal deficiency on the Dp(4;Y)E, spaCat chromosome, males of genotype w1118/DcY; TMS, Sb P[
2-3,ry+](99B)/+; ci gvl eyR svn were individually crossed to w1118; ci gvl eyR svn virgins and Sb+ sv males were recovered.
Cytology:
Larvae carrying DcY, X·DcYL or their derivative chromosomes were identified by their sex. Larvae carrying y+·DcIV or its derivative chromosomes were identified by scoring the yellow phenotype of the ventral cuticle belts. Salivary gland polytene chromosomes were prepared as described by ![]()
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Metaphase chromosomes were prepared as described by ![]()
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Heat-shock regimens:
To induce FLP expression in most cells of the male germline, males must be heat-shocked early in development since the hsp70 promoter of the FLP gene is efficiently induced only in the mitotically dividing stem cells (![]()
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For the visualization of dicentric chromosomes in larval neuroblast cells, larvae carrying hsFLP 2B and a Dc chromosome were heat-shocked at 38° for 1 hr and allowed to recover for 2 to 6 hr before dissection.
Crosses:
For most crosses where the progeny were counted, individual males were crossed to two or three virgin females and the progeny were counted 14 and 18 days afterward. Crosses that produced <10 progeny were considered sterile. At least five fertile individual flies of a genotype were tested. Selected lines were examined more carefully.
Statistical analyses:
Descriptive and analytical statistics were performed using StatView (Abacus Concepts, Berkeley, CA) and the P-stat program (provided by W. R. ENGELS) running on a Macintosh computer.
Determination of lethal phase:
To determine whether offspring with chromosome fragments died, we set up single-pair matings of males with a fragment chromosome and females from a standard tester strain. Three days after setting up the crosses, the parents from vials with progeny were collected and placed together in a bottle to avoid including females that may not have mated. Eggs were then collected for 12 hr on plates of standard cornmeal-agar medium. Eggs were counted immediately after the egg-laying period, and the eggs that remained unhatched 48 hr later (4860 hr AEL) were counted. Newly hatched larvae were removed from the plates during this interval and transferred to vials in order to measure viability between the first instar and adulthood.
| RESULTS |
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Recovery of broken chromosomes
Dispensable chromosomes that form dicentrics:
We constructed three chromosomes that form dicentric chromosomes by FLP-mediated sister-chromatid fusion (Figure 2). Two of the chromosomes are entirely dispensable in somatic cells. The DcY chromosome consists of a normal Y chromosome with a duplication of most of chromosome 4 appended to the tip of the YL arm. The chromosome 4 segment carries two copies of the P element P[RS5] in an inverted relative orientation, at which sister-chromatid fusion can occur. The y+·DcIV chromosome carries a duplication of the tip of the X chromosome, including the y+ gene, on the left arm. Inverted repeats of P[RS5] are carried on the right arm, in chromosome 4 material. Flies with fewer than two copies of 4 material have reduced viability, but when y+·DcIV is a supernumerary chromosome its loss has little effect. The X·DcYL chromosome carries the YL arm and chromosome 4 segment of DcY translocated onto the right arm of the X chromosome. The arm that undergoes sister-chromatid fusion is dispensable; the other arm, the X chromosome, is not.
Dicentric chromosomes in larval neuroblasts:
The generation of dicentric chromosomes with DcY was demonstrated in neuroblast anaphase figures after hsFLP 2B induction (Figure 3). A bridge of chromatin that spans the anaphase poles is seen. The efficiency of FLP-mediated dicentric formation is very high: approximately 70% of anaphase spreads from larvae with hsFLP 2B and DcY contained a dicentric bridge (120 nuclei with bridges/166 nuclei). [Dicentric formation could not be scored in metaphase spreads as was previously done (![]()
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Many of the chromosome spreads that had bridges stretched between two poles of division also had condensed chromosomes at the poles, indicating that the chromosomes had just moved to the poles (Figure 3B). Occasionally, spreads were seen where a bridge of DNA was stretched between two nuclei with decondensed DNA, suggesting that the bridge remained stretched between daughter cells (Figure 3D). Other spreads appeared to contain broken bridges (Figure 3C). In fixed and squashed preparations it is not possible to determine with certainty the fate of a dicentric chromosome: we cannot tell whether an anaphase bridge would have broken, nor can we be sure that what appear to be broken bridges were not broken during preparation. We used genetic tests to make these determinations.
Dicentrics in the male germline:
The markers present on the dispensable chromosomes were used to monitor their fates after the induction of FLP synthesis. In our experiments heat-shock was used to induce the 70FLP gene, and in the male germline this induction is limited to the mitotically dividing stem cells (![]()
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Fragments recovered from DcY: The fate of a dicentric DcY chromosome in X/DcY males was assayed by heat-shocking males that carried 70FLP3A and also were homozygous for the chromosome 4 marker svn, and then test-crossing them to svn females. Offspring from this cross are sv+ only if they inherit the intact DcY chromosome. The progeny of the heat-shocked males included 276 shaven sons (Table 3A). All of the sons from 3 of the 71 fertile heat-shocked males were shaven; this likely indicates that dicentric chromosomes were formed in all the stem cells of those 3 males. Overall, approximately 10% of the sons from these crosses lacked the sv+ marker of DcY. Many retained more proximal markers of the DcY chromosome (described in a subsequent section). We conclude that these sons carry a broken fragment of DcY. We abbreviate fragment chromosomes derived from a dicentric chromosome as Fr chromosomes; in these cases, FrY.
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In this experiment heat-shocked males produced 27% fewer sons bearing an intact DcY than males that were not heat-shocked. This reduction must also be a result of dicentric chromosome formation. Only one-third of this reduction can be accounted for by transmitted fragment chromosomes, implying that two-thirds of germline cells with dicentric chromosomes do not give rise to viable Y-bearing offspring. The loss of Y-bearing offspring must occur postmeiotically. If cells with a dicentric chromosome were eliminated premeiotically there would be an equal loss of X- and Y-bearing offspring. Instead there is a deficit of Y-bearing offspring.
Since DcY carries fertility factors required in primary spermatocytes, cells that lack substantial portions, or all, of DcY are unlikely to complete spermatogenesis. These events will not be detected with X/DcY males. Thus, the frequency of dicentric formation derived from the reduced recovery of DcY is probably an underestimate, because many dicentric chromosomes may result in cellular sterility, eliminating X- and Y-bearing gametes equally. To obtain a more accurate estimate of the frequency of dicentric chromosome formation, we also generated dicentrics with DcY in males carrying C(1;Y) so that the Y fertility factors of DcY were not required for fertility. Transmission of DcY was measured by the production of sv+ sons. There was a 48% reduction in the transmission of the intact DcY chromosome from heat-shocked males relative to the controls that lacked 70FLP, indicating that at least half of the germline cells in these animals have formed dicentrics (Table 3B). A corresponding number of shaven male progeny were recovered. Some of the shaven males recovered here retained more proximal markers from DcY and must therefore carry a FrY chromosome. Unlike the previous experiment with X/DcY fathers, in the experiment with C(1;Y)/DcY fathers, postmeiotic loss of Y-bearing progeny was not observed. Subsequent experiments will show that a portion of the fragment chromosomes exhibit dominant semilethality. The recovered fragment chromosomes that are broken within Y chromatin do not have this property. The majority of the FrY chromosomes that are broken distal to Y chromatin (within the appended chromosome 4) do exhibit this semilethality. Because the Y chromatin is needed for fertility in X/DcY males, there is a selective elimination of the fragments with breaks in Y chromatin in their germlines. We believe this accounts for the disparity: in X/DcY males most of the cells with nonlethal fragment chromosomes are eliminated in spermatogenesis, while the cells with semilethal fragment chromosomes produce an increased proportion of the functional gametes. In C(1;Y)/DcY males it is likely that semilethal fragments are also produced, but that they constitute a much smaller percentage of all FrY-bearing gametes and do not result in an obvious loss of Y-bearing progeny.
Many of the shaven sons of C(1;Y)/DcY males lacked all of the markers of the chromosome 4 duplication. These males may carry shorter FrY chromosomes or no FrY at all. To distinguish between shaven males that carried a fragment chromosome and those with no Y chromosome, we assayed for the suppressive effect of Y chromosome material on position-effect variegation. We crossed C(1;Y)/DcY males that carried 70FLP 3A to females that were homozygous for the variegating P-element insertion P[>whs>]ZQa. This line carries two P elements at 84D-E of chromosome 3 that variegate for eye color because of a position effect on their white genes (![]()
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It is clear that dicentric chromosomes can be made at high frequencies in the male germline and they often break. However, one of the possible fates of a dicentric chromosome in mitosiswhere daughter cells are tied together by an unbroken anaphase bridgecannot be identified with these tests. If this occurred in the male germline we expect that cell proliferation would be blocked and reduce the production of gametes from such males. Induction of FLP in the X/DcY genotype in fact did sterilize 20% of the males, and we considered that this might result if all germline stem cells in these males had formed dicentric bridges that did not break. Alternatively, these germline cells may have lost one or more fertility factors after dicentric breakage. To determine whether the observed male sterility resulted from loss of Y fertility factors or from stretched bridges between cells, we generated males that carried DcY and a C(1;Y) that carried all of the Y fertility factors and tested their fertility after FLP induction. We used three copies of 70FLP to increase the frequency of dicentric formation. When FLP was induced, 68% of the X/DcY males were sterilealmost a fourfold increase relative to noninduced males. However, in males with C(1;Y), the induction of FLP caused no increase in sterility (Table 5). We conclude that sterility in the X/DcY genotype results from the loss of fertility factors on DcY after dicentric chromosome breakage. While we cannot absolutely rule out a low frequency of bridges that stretch but do not break, our results can be sufficiently explained by assuming that dicentric bridges break.
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Fragments from X·DcYL: The Y fertility factors of X·DcYL are not required for fertility in X·DcYL/Y males, and offspring carrying fragments of X·DcYL (X·FrYL chromosomes) can be detected by the presence of the X portion and loss of sv+. When heat-shocked males were mated to attached-X females, 41% of X·YL-bearing gametes were recovered as shaven male progeny (Table 3C). These males must carry an X·FrYL chromosome. There was equal transmission of the X·YL chromosome (X·DcYL and X·FrYL) and its homolog. This confirms our observations with DcY: dicentric chromosomes can break in mitotic divisions and the centric fragments can be transmitted.
The frequency of dicentric formation:
The recovery of 48 and 41% fragment chromosome-bearing males implies that almost half of all viable germline cells had experienced dicentric chromosome formation and breakage with the DcY and X·DcYL chromosomes. Another estimate of the frequency of dicentric formation can be made from the number of male parents that transmit only the broken forms of Dc chromosomes. Four percent of fertile X/DcY males transmitted only FrY and X chromosomes: in every stem cell of these males the DcY chromosome must have undergone dicentric formation. Assuming that there are roughly 1016 germline stem cells in each male (![]()
Dicentric formation with y+·DcIV:
Because structural differences between centromeres can affect the behavior of a dicentric chromosome in female meiosis (![]()
We identified chromosome 4 lines that carried inverted repeats of P[RS5] by heat-shocking and mating males that carried hsFLP 2B and a chromosome 4 with two copies of the element. We looked for loss of distal markers as an indicator of the formation and breakage of dicentric fourth chromosomes. In these crosses we followed the sparkling+ (spa+) gene as a marker for the distal part of chromosome 4. Males from 6 of the 12 lines examined produced some sparkling progeny when FLP was induced, indicating that the insertions in each of these lines are inverted with respect to one another, that dicentric chromosomes were produced, and that the tip of the chromosome was lost. The insertion line 23 was chosen for further characterization; the P elements in this line are inserted at 102C2-C5 of the right arm.
Because there is a paucity of useful markers on chromosome 4, we generated a modified chromosome 4, based on the double insertion line 23, that could be followed through dicentric formation and mitosis. To provide a marker with which to follow inheritance of this chromosome, a duplication of the tip of the X chromosome, including the y+ gene, was recombined onto the left arm of chromosome 4, generating the chromosome y+·DcIV (Figure 2). This duplication is very small and adds very little chromatin to chromosome 4. Therefore, we expect that the strength of the chromosome 4 centromere should not be altered by this duplication.
When flies that carry y+·DcIV chromosome are crossed to C(4)/C(4) flies, the y+·DcIV chromosome is dispensable in the progeny. We assayed the consequences of dicentric formation in the male germline with this chromosome, as we had with DcY and X·DcYL. Broken fragment chromosomes (y+·FrIV chromosomes) were produced (recognized as yellow+ sparkling progeny); chromosome loss (yellow sparkling progeny) was not observed (Table 6). There was also a 9% reduction in the recovery of the y+·DcIV chromosome. With two copies of 70FLP there was a further reduction in the recovery of y+·DcIV (from 91 to 71%), and there was an increase in the number of progeny with fragment chromosomes (line 3 of Table 6). However, the number of y+·FrIV-bearing progeny was much less than the number of missing y+·DcIV chromosomes in both cases. This implies that there were many fragment chromosomes that could not be recovered. There were no males that produced only y+·FrIV chromosomes.
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It is possible that loss of chromosome 4 material decreases the recovery of fragment chromosomes from the y+·DcIV/4 males as a consequence of the resultant germ-cell aneuploidy. We tested the fate of the chromosome 4 dicentrics produced by FLP in males where y+·DcIV was present as a supernumerary chromosome 4. The transmission of the intact y+·DcIV decreased from 91%, when the homolog of DcIV was a normal 4, to 62%, when the homolog of DcIV was a compound chromosome 4 (Table 6). This suggests that in y+·DcIV/4 males many cells that made dicentrics were inviable because of chromosome 4 aneuploidy, and failed to produce any gametes. With the addition of a third copy of chromosome 4 these cells can proceed through spermatogenesis. Thus, the cells that make functional sperm now contain a higher percentage of cells with dicentric chromosomes, and the transmission of the intact y+·DcIV chromosome, compared to its homolog, is reduced. There was no significant effect of dicentric formation on fertility (Table 6).
While the presence of C(4)RM increased the measurable frequency of dicentric formation, there was no commensurate increase in the recovery of progeny carrying y+·FrIV chromosomes. Just as with the fragments of DcY, the reduced recovery of progeny carrying the y+·FrIV chromosome must result from a postmeiotic effect. The evidence provided below suggests that many y+·FrIV chromosomes are not recovered because they are lethal.
Chromosome fragments generated by P transposase:
Although broken chromosomes are very rarely recovered after irradiation of normal males or females (![]()
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chromosomes, occurred at frequency of 0.26 events/fertile parent (12 independent events found from 46 transposase-bearing male parents). A line was established from each FrY
-bearing male. Other exceptional males were observed: one that was gvl+ ey sv+; two that were gvl ey sv+ and retained the whs P element; and a fourth that was gvl ey sv. These were sterile and were probably instances where interstitial portions of the chromosome had been deleted (see ![]()
Fragments of chromosome 4, called FrIV
, were recovered at the lower frequency of 0.02 events/fertile parent (5 independent events from 270 male parents). Four of the spa male progeny were crossed to y w; C(4)RM, spapol virgins. Two were sterile and the third transmitted only the homolog to progeny. The fourth male was fertile and transmitted a chromosome derived from the P[RS5]1B chromosome. This line was named FrIV
A; it retains a copy of P[RS5] at 102C2-5 but lacks chromosome 4 material distal to 102D1-2.
FrY and FrIV chromosomes were recovered much more readily by dicentric chromosome formation than by transposase. FrY chromosomes were produced approximately three times more frequently after dicentric formation than after exposure to transposase, and FrIV chromosomes were recovered 16 times more frequently.
Characterization of broken chromosomes
Dominant semilethality characterizes some fragment chromosomes:
The recovery of fragment chromosomes from dicentric chromosomes demonstrates that a chromosome broken in this way can be viable. However, the overall deficit of Dc chromosomes suggests that some Fr -bearing gametes or zygotes are inviable. This effect was especially pronounced with y+·DcIV, where in one experiment 95% of the fragment chromosomes were not recovered (Table 6, line 5). This hypothesis is strongly supported by our observations (below) that many of the recovered fragments exhibit a dominant semilethality.
Transmission of Y chromosome fragments: FLP synthesis was induced in X/DcY males, those males were mated, and lines of independently generated FrY chromosomes were established for further characterization. Two groups of FrY lines are apparent (Figure 5). In the first group, which includes the DcY control and four FrY lines, the Y was transmitted at a normal rate. The second group, with ten FrY lines, exhibited a great reduction in the rate of FrY transmission, which is observed as a reduction in male progeny from an X/FrY father. Many of these low-transmission lines also showed sterility of some males (the y-axis of Figure 5). Males from a given line showed variability in their transmission ratios, but this variability was not heritable (not shown).
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We have considered two possible explanations for the reduced transmission of the fragment chromosomes. The transmission of FrY chromosomes might be reduced by the elimination of FrY-bearing gametes during meiosis or spermiogenesis. Alternatively, some of the zygotes that receive FrY-bearing gametes might die. We distinguished these two possibilities by scoring egg-to-adult survival of zygotes from parent males carrying a low-transmission fragment chromosome. Crosses with males from the FrY1A line showed a significant level of embryonic lethality; this lethality can account for two-thirds of the total reduction in fragment-bearing progeny (Table 7).
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Fragment chromosomes of DcY that were generated by P transposase could also be divided into two groups by their rates of transmission: three lines were transmitted at a normal rate, and one line (FrY
14A) showed low transmission similar to that of low-transmission FrY lines (Figure 5).
We measured the transmission from 12 X·FrYL lines (Figure 5). Two showed decreased transmission of the X·FrYL chromosome (X·FrYLd26e and X·FrYLd34r).
Transmission of chromosome 4 fragments: The transmission of FrIV chromosomes and of fourth chromosomes from three control genotypes was assayed. For controls, we tested the intact chromosome y+·DcIV, the chromosome Dp(1;4)193, y+·spapol (from which the y+ duplication on y+·DcIV was derived), and the chromosome Df(4)G. Df(4)G chromosome was assayed because it is a deficiency of all chromosome 4 material distal to 102E2-10, and therefore lacks a region similar to that missing from the y+·FrIV chromosomes. It is capped with the tip of the X chromosome. All three control chromosomes were transmitted at the same rate as their homologs [either a normal 4 marked with ciD or C(4); Figure 5]. We measured transmission of y+·FrIV chromosomes from males heterozygous for C(4). Most lines exhibited reduced transmission of y+·FrIV, with transmission ratios ranging from 0.01 to 0.86 relative to the C(4) homolog (Figure 5). Egg-to-adult counts with the low-transmission y+·FrIVC72 line showed that its reduced transmission could be entirely accounted for by embryonic lethality (Table 7).
Males that carried the transposase-induced fragment chromosome FrIV
A transmitted it at a ratio comparable to the controls. There was no reduced transmission of FrIV
A, although it is associated with sterility when heterozygous with ciD (Figure 5). Males that carried FrIV
A and C(4) were usually fertile (not shown), suggesting that the sterility of FrIV
A/ciD males is caused by aneuploidy.
At least some of the reduced transmission of the y+·FrIV chromosome is caused by the accumulation of additional copies of chromosome 4 in the lines carrying y+·FrIV (MATERIALS AND METHODS). Both viability and meiotic segregation of fourth chromosomes are affected by this aneuploidy (![]()
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We conclude that some fragment chromosomes generated from DcY, X·DcYL, and y+·DcIV share a similar defect that causes embryonic lethality and leads to reduced transmission of the fragment chromosome. The similar behavior of these chromosomes must be due to their common feature: the broken chromosome end.
Structure of fragment chromosomes:
MULLER found that many chromosomes with apparently terminal deficiencies were in fact more complex rearrangements that maintained a telomere at the end. In order to determine whether the fragment chromosomes that we generated by dicentric breakage had been involved in further rearrangements, and in the hope of providing insight into the nature of the semilethal fragments, we characterized the structure of the recovered Fr chromosomes with genetical and cytological assays. [The detailed results are presented in ![]()
Genetic structure of the recovered chromosome fragments: In some of the crosses where dicentrics were made with DcY or X·DcYL, flies also were homozygous for a chromosome 4 marked with gvl eyR svn. In these cases, markers both proximal and distal to the site of the FRT insertions also could be assayed in progeny. In other cases, the positions of breakpoints were mapped in further crosses. Fragments of X·DcYL were also characterized with respect to whether they carried all the male fertility factors of YL. Many fragment chromosomes were missing proximal markers (Figure 6). In no case was a distal marker retained while a more proximal one was absent. We conclude that the site of dicentric chromosome breakage is not limited to a single location.
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We expected that if a dicentric bridge broke asymmetrically in mitosis one daughter cell would receive a short chromosome fragment and the other would receive a long fragment. When dicentric formation was induced in males carrying X·DcYL and homozygous for the gvl eyR svn chromosome 4, the recovery of progeny lacking gvl+ and ey+ implied that asymmetric breakage of the dicentric bridge did occur, because these flies must carry short fragments. A fly with the corresponding long fragment should be gvl+ ey+ sv ; however, there were five males that produced only grooveless eyeless shaven offspring. Similarly, there was one C(1;Y)/DcY male that produced only this kind of offspring after dicentric formation. Only the short fragment chromosomes were recovered, although the corresponding long fragments must also have been generated. This led us to ask whether any of the fragment chromosomes that we recovered were long fragments. For both FrY and X·FrYL chromosomes, the breakpoints that were mapped distal to the ey+ gene could be located in one of two different regions of the chromosome. An eyeless+ shaven fly might carry a short fragment broken between ey+ and the site of sister-chromatid fusion, or a long fragment broken anywhere along the length of the YL arm, so that the recovered chromosome is deficient for material distal to the P insertions and duplicated for some proximal material. Such a chromosome will also carry two P-element insertions. This can be detected using PCR amplification with primers specific to the P element ends. We screened, by PCR, all FrY and X·FrYL lines with breakpoints that had been genetically mapped as distal to the ey+ marker. (The y+·FrIV chromosomes could not be analyzed in this way because the distance between the two P elements is too great.) Although we found many lines that carried one P element, no lines appeared to carry more than one P element. However, if DNA near the end of a chromosome cannot be easily amplified, perhaps because telomeric DNA is compacted into an unusual chromatin structure, then this result would be misleading. Therefore, we do not conclusively rule out the possibility that some fragment chromosomes carry two P elements near the terminus. However, if any fragments do include sequences of both P elements, we imagine that the break must be close to those sequences. Cytological analyses (below) confirmed this conclusion.
Cytological structure of the recovered chromosome fragments:
Polytene chromosomes of larvae from fragment chromosome lines were examined in order to confirm the genetic characterization. Eleven y+·FrIV chromosomes were examined: all ended at 102C1-5 (Figure 6 and Figure 7), which is the site of sister-chromatid fusion (i.e., the location of P[RS5] elements). Nine FrY chromosomes were examined cytologically. They exhibited breaks at various points in the chromosome 4 material (Figure 6). X·FrYL chromosomes were examined by polytene or diploid cytology (Figure 7). These ended at differing positions, with breakpoints in euchromatin or in heterochromatin. One X·FrYL breakpoint was located near the site of sister-chromatid fusion. There was no evidence of other rearrangements on these chromosomes. We conclude that the recovered chromosomes have terminal deficiencies. We also confirmed by cytology that FrIV
A and four FrY
(4, 9B, 11B, 14A) fragment chromosomes induced by P transposase truly were terminal deficiencies. The other putative FrY
lines were not characterized.
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The breakpoints of normal-transmission fragment chromosomes were found in all the genetically defined intervals along the chromosomes, and all but one of the normal-transmission fragments lacked P[RS5] sequences. However, all low-transmission FrY, X·FrYL, and y+·FrIV chromosomes were broken near the P[RS5] elements used to generate the dicentric chromosome, and retained a P[RS5] remnant near this end (Figure 6). The coincidence of the low-transmission with the presence of P-element sequences near the broken end suggests that these sequences may play a role in determining the properties of fragment chromosomes. One y+·FrIV chromosome, which we first categorized as a low-transmission line, later changed to normal-transmission behavior. We examined the salivary cytology of this chromosome after the change in transmission frequency. The chromosome ended at 102C1-5, as do the other low-transmission lines, but did not have P-element sequences (not shown). It is possible that these sequences were present on the originally isolated chromosome but were later lost, resulting in the change in behavior.
Hybridization for telomere sequences on the recovered chromosome fragments:
If a telomere is normally an essential chromosomal element, broken chromosomes should not be viable unless they have acquired a new telomere. We used in situ hybridization to examine the ends of the FrY, X·FrYL, and y+·FrIV chromosomes for the presence of HeT telomeric sequences. Fourteen of the fragment chromosome lines showed no hybridization at the end of the Fr chromosome, although hybridization to the tips of other chromosomes and to the tip of the regular chromosome 4 was observed (Figure 8). One X·FrYL chromosome did hybridize with the HeT probe and therefore acquired HeT telomeric sequences, and one FrY chromosome also showed a slight but repeatable hybridization signal and may also have an HeT telomere (Figure 8). The y+·FrIV chromosome that showed a change in behavior did not show a hybridization signal. Although in situ hybridization methods are sufficiently sensitive to detect a single copy of an HeT sequence at the end of a chromosome (![]()
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| DISCUSSION |
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The fate of dicentric chromosomes in mitosis:
We constructed chromosomes that are dispensable for cell viability and that form dicentric chromosomes by FLP-mediated USCE. In the experiments reported here, we deduced the fate of dicentric chromosomes in mitosis by inducing FLP in males and examining their progeny. In the male germline the 70FLP gene that we used is only induced in the mitotically dividing stem cells (![]()
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In contrast, a dicentric X chromosome that is stretched at the reductional division in female meiosis usually does not break (![]()
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Although we observed that a dicentric chromosome generated by FLP-mediated USCE is not lost in mitosis, ring-X chromosome loss can occur in the early syncytial embryo or during cellular mitoses (![]()
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The fact that fragment chromosomes can be recovered suggests that the broken ends have been repaired by the acquisition of telomeres. However, most of the fragment chromosomes we recovered have not acquired HeT sequences at their termini. Broken chromosomes recovered by other means also do not usually acquire HeT sequences (![]()







