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Afr1p Regulates the Saccharomyces cerevisiae
-Factor Receptor by a Mechanism That Is Distinct From Receptor Phosphorylation and Endocytosis
Colleen Davisa,
Peter Dubeb, and
James B. Konopkaa
a Department of Microbiology, State University of New York, Stony Brook, New York 11794-5222
b Program in Molecular and Cellular Biology, State University of New York, Stony Brook, New York 11794-5222
Corresponding author: James B. Konopka, Department of Microbiology, SUNY, Stony Brook, NY 11794-5222, konopka{at}asterix.bio.sunysb.edu (E-mail).
Communicating editor: M. JOHNSTON
| ABSTRACT |
|---|
The
-factor pheromone receptor activates a G protein signaling pathway that induces the conjugation of the yeast Saccharomyces cerevisiae. Our previous studies identified AFR1 as a gene that regulates this signaling pathway because overexpression of AFR1 promoted resistance to
-factor. AFR1 also showed an interesting genetic relationship with the
-factor receptor gene, STE2, suggesting that the receptor is regulated by Afr1p. To investigate the mechanism of this regulation, we tested AFR1 for a role in the two processes that are known to regulate receptor signaling: phosphorylation and down-regulation of ligand-bound receptors by endocytosis. AFR1 overexpression diminished signaling in a strain that lacks the C-terminal phosphorylation sites of the receptor, indicating that AFR1 acts independently of phosphorylation. The effects of AFR1 overexpression were weaker in strains that were defective in receptor endocytosis. However, AFR1 overexpression did not detectably influence receptor endocytosis or the stability of the receptor protein. Instead, gene dosage studies showed that the effects of AFR1 overexpression on signaling were inversely proportional to the number of receptors. These results indicate that AFR1 acts independently of endocytosis, and that the weaker effects of AFR1 in strains that are defective in receptor endocytosis were probably an indirect consequence of their increased receptor number caused by the failure of receptors to undergo ligand-stimulated endocytosis. Analysis of the ligand binding properties of the receptor showed that AFR1 overexpression did not alter the number of cell-surface receptors or the affinity for
-factor. Thus, Afr1p prevents
-factor receptors from activating G protein signaling by a mechanism that is distinct from other known pathways.
CONJUGATION of the yeast Saccharomyces cerevisiae is under investigation because genetic approaches can be used to examine the mechanisms of hormone signal transduction. Conjugation is initiated when haploid cells of mating type MATa and MAT
signal each other with peptide pheromones (![]()
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subunit of a heterotrimeric G protein to bind GTP. The GTP-bound G
subunit then dissociates from the other subunits, allowing the free Gß
complex to activate the subsequent steps in the pheromone pathway. The downstream elements in this pathway include protein kinases with similarity to mitogen activated protein (MAP) kinases and a pheromone-responsive transcription factor, Ste12p, that induces the expression of the genes that function in mating. Pheromone signaling also stimulates cell division arrest through inactivation of the Cdc28p cyclin-dependent kinase. Thus, the mating pheromone signal pathway shows remarkable similarity to the signal transduction pathways in mammalian cells. In fact, some mammalian homologs can substitute for the yeast counterparts to activate the yeast pheromone pathway (![]()
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Studies on a wide range of organisms including S. cerevisiae (![]()
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To help determine the mechanisms used to regulate GPCR signaling, we previously carried out a screen to identify genes that negatively regulate the pheromone signal pathway (![]()
gene. In contrast to the effects of AFR1 overexpression, deletion of AFR1 had only weak effects on the overall intensity of pheromone signaling (![]()
![]()
-factor receptors (![]()
![]()
-factor. Interestingly, cells lacking AFR1 showed a defect in forming normal mating projections that was similar to the defect observed for cells that lack the C-terminal regulatory domain of the
-factor receptors (![]()
In this study, experiments were carried out to examine the mechanism of AFR1 action. Afr1p does not show strong sequence similarity to any previously characterized proteins in other organisms to suggest its function. However, AFR1 showed an interesting genetic relationship with the receptor C terminus because the effects of AFR1 overexpression were weaker in a cell that produces C-terminally truncated receptors (![]()
-factor receptor acts as a regulatory domain because yeast cells lacking this domain of the receptor are at least 10-fold more sensitive to
-factor (![]()
![]()
-factor, similar to what has been observed for many other members of the GPCR family (![]()
-factor receptors by endocytosis (![]()
![]()
![]()
-factor. The results indicate that AFR1 regulates signaling by a mechanism that is independent of the previously characterized effects of receptor phosphorylation and receptor endocytosis that are mediated by the receptor C terminus.
| MATERIALS AND METHODS |
|---|
Strains and media:
Yeast strains are described in Table 1. Cells were grown in media described by ![]()
STE2 CRY1 strain or a MAT
ste2::LEU2 CRY1 strain and then selecting for cells that underwent mitotic recombination to become homozygous MATa cells. A YIp351-STE2 plasmid was integrated into tetraploid strain JK7434-2 to construct a strain with five copies of STE2. Plasmids were transformed into yeast strains using lithium acetate (![]()
|
Plasmids:
The YEp24-AFR1 plasmid and the YEp24-GPA1 plasmids were isolated as described previously because they made MATa cells resistant to
-factor (![]()
![]()
![]()
![]()
Pheromone response assays:
Halo assays for
-factor-induced cell division arrest were performed by spreading 1.5 x 105 cells from an overnight culture on the surface of a solid medium agar plate.
-Factor was added to sterile filter disks (Difco, Detroit) which were then applied to the surface of the agar plate and incubated at 30° for 3 days. Halo assays performed with the end4::LEU2 cells were incubated at 23° for 5 days since mutation of END4 causes temperature sensitive growth (![]()
-factor in the medium was assayed by adjusting a log phase culture to 4 x 106 cells/ml and then
-factor was added to a final concentration of 10-7 M. Cells were incubated at 30°, and then samples of the culture supernatant were withdrawn at various times and assayed for ability to promote cell division arrest of the supersensitive strain 6360-17-2a in a halo assay.
Ligand binding assays:
-factor binding assays were carried out essentially as described previously (![]()
![]()
-factor to tetraploid strains was carried out with cells that were grown overnight to logarithmic phase. Cells were washed twice with ice-cold inhibitor medium (YEPD medium containing 10 mM KF and 10 mM NaN3) and then resuspended at a density of 5 x 108 cells/ml. Cells (50 µl) and 50 µl of 20 nM 35S-
-factor were incubated for 30 min, the cells were collected on a Whatman GF/C filter, washed to remove unbound
-factor, and then counted in a scintillation counter. Nonspecific binding assays were performed in the presence of a 100-fold excess of non-radiolabeled synthetic
-factor (Bachem, King of Prussia, PA). The effects of AFR1 overexpression on
-factor binding were examined with cells that were grown overnight to log phase, and then incubated in the presence of 10-7 M
-factor for the indicated time. The cells were then washed to remove the bound
-factor essentially as described (![]()
![]()
-factor to dissociate. The cells were then pelleted by centrifugation and resuspended in inhibitor medium three times to remove the
-factor, and resuspended at a density of 109 cells/ml. Ligand binding assays were carried out by incubating 50 µl cells and 50 µl 35S-
-factor for 30 min, and then cells were collected on a Whatman GF/C filter, the bound
-factor was quantitated as described above. Cells that were exposed to
-factor for various times were assayed for binding using 20 nM 35S-
-factor. Scatchard plots were carried out on cells that were exposed to
-factor for 3 hr prior to the binding assays. The Scatchard plots represent the average values from three independent assays that were each performed in duplicate. 35S-labeled
-factor was purified by chromatography on a Bio-Rex 70 column from the culture supernatant of MAT
cells labeled with 35S-SO4 as described previously (![]()
Western blot analysis:
The production of Ste2p and Afr1p was analyzed in cells that were grown to logarithmic phase and then incubated in the presence or absence of 10-7 M
-factor for the indicated time. Approximately 2.5 x 108 cells were lysed by agitation with glass beads in 250 µl gel loading buffer (2% SDS, 50 mM Tris pH 6.8, 8 M urea). The protein concentration of the extracts was determined using a BCA Protein Assay kit (Pierce, Rockford, IL). Equal amounts of protein (50 µg) were loaded in each lane of a 9% SDS-polyacrylamide gel and resolved by electrophoresis. The proteins were electrophoretically transferred to nitrocellulose, and probed with rabbit anti-Afr1p antibodies (![]()
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| RESULTS |
|---|
Multicopy plasmid overproduction of Afr1p:
Multicopy plasmid overexpession of AFR1 makes MATa cells resistant to
-factor so the extent to which these cells overproduce the AFR1 protein (Afr1p) was analyzed. Cells were stimulated with
-factor for 2 hr to induce the expression of the AFR1 gene and then the levels of Afr1p were compared by Western blot analysis. As shown in Figure 1A, cells carrying the multicopy YEp181-AFR1 plasmid produced more Afr1p than cells carrying a YEp181 vector plasmid. Comparison of dilutions of these extracts indicates that Afr1p was overproduced about 10-fold (not shown). In addition, a higher basal level of Afr1p was also detected in the absence of
-factor for cells carrying the YEp181-AFR1 plasmid. A time course experiment (Figure 1B) showed that the amount of Afr1p increased rapidly for the first 2 hr and then stayed at a high level but decreased slowly over time as cells adapted and became resistant to
-factor. Similar levels of Afr1p overproduction were obtained with cells carrying AFR1 on the LEU2-selectable multicopy vector YEp181 or the URA3-selectable multicopy vector YEp195 (Figure 1C and data not shown) that were used in this study.
|
To confirm that Afr1p overproduction makes cells resistant to
-factor by negatively regulating signaling, and not by causing the destruction of
-factor, we examined the stability of
-factor in the medium. This assay was carried out in a bar1-1 mutant strain that lacks the secreted protease that degrades
-factor in the medium. As shown in Figure 2A,
-factor added to a culture of bar1-1 cells carrying YEp181 or YEp181-AFR1 was stable for at least 6 hr. In spite of the continued presence of
-factor, about 29% of cells carrying YEp181-AFR1 had resumed budding whereas less than 2% of cells carrying the YEp181 vector showed evidence of budding. As expected, BAR1 cells did not contain detectable
-factor after 1 hr under these conditions indicating that the
-factor was degraded. The resistance to
-factor promoted by Afr1p overproduction was also independent of cell density when assayed by plating dilutions of cells on plates containing
-factor (Figure 2B). Altogether, these results demonstrate that Afr1p overproduction acts to negatively regulate signal transduction, and does not simply lead to the destruction of
-factor.
|
Inhibition of receptor endocytosis decreases the effects of Afr1p overproduction on signaling:
Our previous studies showed that AFR1 overexpression caused wild-type STE2 cells to become resistant to
-factor, but the effects of AFR1 overexpression were not readily detectable in ste2-T326 cells that lack most of the cytoplasmic C-terminal domain of the
-factor receptor (![]()
-factor-induced cell division arrest in a halo assay. As shown in Figure 3A, cell division arrest was assayed by placing a filter disk containing
-factor on a lawn of cells spread on the surface of a solid medium petri plate. Diffusion of
-factor into the medium arrested the division of wild-type cells carrying the vector YEp24 resulting in a clear zone (halo) surrounding the filter disk. In contrast, wild-type cells carrying either the YEp24-AFR1 or YEp195-AFR1 multicopy plasmids failed to form a clear zone of cell division arrest indicating that they are resistant to
-factor. As we observed previously, ste2-T326 cells carrying YEp24-AFR1 did not display a significant change in sensitivity to
-factor. However, ste2-T326 cells carrying YEp195-AFR1 (Figure 3A) or YEp181-AFR1 (not shown) produced a smaller halo indicating they were more resistant to
-factor. The effects of AFR1 overexpression were probably more noticeable in the ste2-T326 cells carrying the YEp195-AFR1 or YEp181-AFR1 plasmids because they contain a different genomic fragment of AFR1 than the YEp24-AFR1 plasmid (see MATERIALS AND METHODS) and result in about twofold greater Afr1p overproduction (Figure 1C and data not shown). The YEp181-AFR1 and YEp195-AFR1 plasmids contain the same AFR1 fragment and had equivalent effects on pheromone signaling (Figure 2 and data not shown). In spite of the stronger effects of these new AFR1 plasmids, AFR1 overexpression still appears to act early in the signaling pathway because YEp181-AFR1 did not suppress the cell division arrest caused by deletion of GPA1 that encodes the G
subunit (Figure 3B).
|
The observation that AFR1 overexpression promotes resistance in ste2-T326 cells indicates that Afr1p acts independently of the sequences that promote ligand-induced endocytosis of the
-factor receptors since these sequences are deleted in ste2-T326 receptors (![]()
-factor required phosphorylation of the receptor C terminus. The ste2-D4ala receptors are not phosphorylated in vivo because the majority of the potential phosphorylation sites were removed by deletion of residues 297-391, and then the remaining four serine and threonine residues were mutated to alanine (![]()
![]()
-factor even though these cells produce wild-type receptors with a full-length C terminus. Thus, the effects of Afr1p overproduction were weaker in strains that are defective in ligand-induced receptor endocytosis.
Afr1p does not alter stability of
-factor receptor protein:
To investigate the mechanism by which Afr1p alters receptor signaling, we examined the level of the receptor protein (Ste2p). This analysis was carried out with cells that were induced with
-factor for 3 hr, a time at which Afr1p production is high and cells appear resistant to
-factor. As expected, Western blot analysis (Figure 4) showed that the gel mobility of Ste2p is heterogeneous due to glycosylation (![]()
-factor treatment due to ubiquination (![]()
|
We next examined the possibility that Afr1p overproduction affected signal transduction by promoting the removal of receptors from the cell surface by endocytosis. Normally, the binding of
-factor to its receptor causes the receptors to be targeted for endocytosis and degradation in the vacuole (![]()
-factor. Cells were treated with cold
-factor for different times to induce AFR1 expression and to promote receptor endocytosis. The cells were then washed to allow the bound
-factor to dissociate, and assayed for the ability to bind 35S-labeled
-factor. The results showed that cells carrying YEp181-AFR1 or the control vector bound similar amounts of
-factor at all time points (Figure 5). If anything, it appeared that cells overexpressing AFR1 displayed slightly greater ability to bind
-factor. Both of these cell types maintain a high level of receptors in the presence of
-factor because the endocytosed receptors are replaced by newly synthesized receptors. These results indicate that AFR1 overexpression does not diminish signaling by decreasing the number of cell-surface receptors.
|
Afr1p overproduction does not alter the receptor affinity for
-factor:
The possibility that Afr1p promotes resistance to
-factor by changing the affinity of the receptor for
-factor was examined in equilibrium binding assays. Cells were treated with
-factor for 3 hr to induce Afr1p, washed to allow the cold
-factor to dissociate, and then assayed for ability to bind 35S-labeled
-factor. The results were analyzed on a Scatchard plot (Figure 6). The Kd for the binding of
-factor to its receptor, as reflected by the slope of the line in the Scatchard plot, was about 5.4 nM for cells carrying a control vector and 4.6 nM for cells carrying YEp181-AFR1 plasmid. This indicates that there is no significant difference in binding affinity as a result of Afr1p overproduction. The Scatchard plots also indicated that Afr1p overproduction did not have significant effects on the number of receptors per cell, in agreement with Figure 5. As derived from the X-intercept values, both YEp181 and YEp181-AFR1 cells contained about 4000 surface binding sites per cell.
|
Gene-dosage relationship between AFR1 and STE2:
Since Afr1p overproduction did not increase receptor endocytosis, the observations that the ste2-T326 and end4::LEU2 mutations that inhibit receptor endocytosis also impaired the ability of Afr1p to promote resistance to
-factor suggested that Afr1p function is related to the number of receptors, and not directly to the process of endocytosis. To investigate this relationship further, we examined the effects of Afr1p overproduction in a series of yeast strains that vary in receptor production. MATa tetraploid yeast strains were constructed that contain five, four, three, two, or one copy of the receptor gene, STE2. As a control, we showed that the level of cell-surface receptors varied with STE2 gene dosage by assaying the ability of these strains to bind 35S-labeled
-factor (Figure 7). The variations in receptor number did not affect the overall sensitivity of these strains since all of the tetraploid strains produced similar sized halos when carrying a control plasmid vector (Figure 8). This result is in agreement with previous studies showing that the number of receptors is not limiting for pheromone signal transduction (![]()
![]()
|
|
In contrast to the vector control, tetraploid cells carrying multicopy AFR1 plasmids showed different sized halos depending on the number of copies of STE2. The effects of AFR1 overexpression also appeared to be different in the tetraploid cells, as compared to the haploid cells, because a tetraploid cell carrying four copies of STE2 showed only a weak increase in resistance to
-factor. However, the degree of
-factor resistance promoted by AFR1 overexpression was inversely proportional to the number of STE2 genes as tetraploid cells carrying fewer copies of STE2 showed proportionally increased resistance to
-factor (Figure 8). In addition, tetraploid cells carrying YEp195-AFR1 showed greater resistance to
-factor than did cells carrying the YEp24-AFR1 plasmid (not shown); consistent with the observation described above that cells carrying YEp195-AFR1 produced about twofold more Afr1p. As a control, we also examined the effects of overexpressing the GPA1 gene that encodes the
subunit of the pheromone-responsive G protein. Overproduction of the G
subunit is thought to promote resistance to
-factor by sequestering the Gß
moiety (![]()
![]()
-factor (Figure 8). These results demonstrate that the ability of Afr1p to promote resistance to
-factor is specifically related to the number of receptors in the cell.
The gene dosage relationship between AFR1 and STE2 was also examined in haploid cells the overexpress STE2. To overexpress STE2, the cells that carry one copy of STE2 in the genome were transformed with a multicopy YEp24-STE2 plasmid. This plasmid causes about a fivefold increase in the basal number of cell-surface receptors (![]()
-factor in cells carrying the YEp24 vector and in cells that overexpress a defective receptor gene. Cells carrying the linker insertion mutant alleles ste2-I169 or ste2-I229 on a YEp24 plasmid vector overproduce nonfunctional receptor proteins (![]()
-factor (Figure 9). These results raise the possibility that Afr1p may preferentially act on activated receptors. However, differences in the structure or subcellular localization of the mutant receptor proteins may also account for these results.
|
| DISCUSSION |
|---|
Mechanism of Afr1p action:
Our previous studies indicated that Afr1p acts on an early step in the pheromone signal pathway and suggested that AFR1 may act in a pathway with the receptor C terminus (![]()
![]()
![]()
-factor receptor can determine the sensitivity of the cells to
-factor.
AFR1 appears to be distinct from the other regulatory mechanisms that act on the
-factor receptor in that it does not require the cytoplasmic C terminus to influence the activity of the central region of the receptor containing the seven transmembrane segments. Instead, Afr1p overproduction was found to inhibit signaling emanating from the central region of the
-factor receptor that is responsible for binding ligand and G protein activation. Analysis of the effects of Afr1p overproduction on the ligand binding properties of the receptors showed that Afr1p did not significantly alter the number of cell-surface receptors or the affinity for
-factor. These results suggest that Afr1p acts to prevent G protein activation.
An interesting possibility suggested by the data is that Afr1p may act by forming a complex with the receptors. The intracellular loops that connect the transmembrane segments of the receptor play a key role in G protein activation. Afr1p should be able to interact directly with these intracellular loops since both Afr1p and the receptors are present at the plasma membrane ( ![]()
![]()
![]()
-factor receptor (![]()
![]()
-factor. In addition, sst2- mutant strains are defective in adapting to even a short pulse of
-factor (![]()
![]()
-factor receptor truncation strains and strains with increased STE2 dosage [(![]()
The regulation of signaling by Afr1p appears to be different from previously identified mechanisms for the regulation of GPCR signaling in other organisms. Regulation of receptor signaling has been studied in detail for rhodopsin and the adrenergic receptors (![]()
![]()
![]()
![]()
AFR1 function during yeast mating:
Studies on mating pheromone-induced morphogenesis indicate that regulation of receptor signaling is important for cells to form typical mating projections that become the site of cell fusion during conjugation. Wild-type cells stimulated with
-factor arrest their division cycle in G1 and then undergo polarized morphogenesis to form a mating projection (![]()
![]()
-factor receptor have a defect in forming typical mating projections that is proportional to their defect in adaptation (![]()
![]()
![]()
-factor receptors are detected throughout the projection ( ![]()
![]()
![]()
![]()
![]()
-factor by causing mislocalization of Afr1p and allowing it to inhibit signaling in other parts of the cell. However, studies on Afr1p mutants indicate that mislocalization of Afr1p is not sufficient to observe increased resistance to
-factor (![]()
| ACKNOWLEDGMENTS |
|---|
We thank A. NEIMAN, C. ROY, and the members of our lab for their helpful comments on the manuscript. We also thank L. HICKE and H. RIEZMAN for plasmids. This work was supported by grants from the American Cancer Society (VM-40) and the American Heart Association.
Manuscript received September 29, 1997; Accepted for publication October 27, 1997.
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