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Originally published as Genetics Published Articles Ahead of Print on September 1, 2006.
Genetics, Vol. 174, 1057-1061, October 2006, Copyright © 2006
doi:10.1534/genetics.106.060467
Precise Centromere Mapping Using a Combination of Repeat Junction Markers and Chromatin Immunoprecipitation–Polymerase Chain Reaction
Amy C. Luce*,
,
Anupma Sharma
,
Oliver S. B. Mollere,
Thomas K. Wolfgruber,
Kiyotaka Nagaki
,1,
Jiming Jiang,
Gernot G. Presting and
R. Kelly Dawe*,,2
* Department of Plant Biology and Department of Genetics, University of Georgia, Athens, Georgia 30602, Department of Molecular Biosciences and Bioengineering, University of Hawaii, Honolulu, Hawaii 96822 and Department of Horticulture, University of Wisconsin, Madison, Wisconsin 53706
2 Corresponding author: Department of Plant Biology, Miller Plant Sciences Bldg., University of Georgia, Athens, GA 30602.
E-mail: kelly{at}plantbio.uga.edu
Centromeres are difficult to map even in species where genetic resolution is excellent. Here we show that junctions between repeats provide reliable single-copy markers for recombinant inbred mapping within centromeres and pericentromeric heterochromatin. Repeat junction mapping was combined with anti-CENH3-mediated ChIP to provide a definitive map position for maize centromere 8.
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