| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
Genetics, Vol. 168, 2217-2226, December 2004, Copyright © 2004
doi:10.1534/genetics.104.033522
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Department of Ecology, Evolution and Organismal Biology, Iowa State University, Ames, Iowa 50011
1 Corresponding author: UBC Botanical Garden and Centre for Plant Research, University of British Columbia, MacMillan Bldg., 2357 Main Mall, Vancouver, BC V6T 1Z4, Canada.
E-mail: keith.adams{at}ubc.ca
5% of the duplicated genes in the allotetraploid were inferred to have been silenced or downregulated. Sequencing of 24 AFLP-cDNA fragments revealed genes with a variety of functions. Analysis by RT-PCR showed silencing or a strong expression bias toward one copy for 9 of 13 genes examined. Comparisons of expression patterns among eight organs in the allopolyploid showed that silencing and preferential expression are organ specific. Examination of silencing patterns in two other synthetic polyploids, of genotype AADD, showed that the same gene can be silenced independently in different genotypes. These results provide a detailed portrayal of gene silencing events that can occur following allopolyploidization and suggest epigenetic causal factors. This article has been cited by other articles:
 |
|
 |
|
  Y. Wu, Z. Zhu, L. Ma, and M. Chen The Preferential Retention of Starch Synthesis Genes Reveals the Impact of Whole-Genome Duplication on Grass Evolution Mol. Biol. Evol., June 1, 2008; 25(6): 1003 - 1006. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 R. Hovav, J. A. Udall, B. Chaudhary, R. Rapp, L. Flagel, and J. F. Wendel Partitioned expression of duplicated genes during development and evolution of a single cell in a polyploid plant PNAS, April 22, 2008; 105(16): 6191 - 6195. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 Y. Zhuang and K. L. Adams Extensive Allelic Variation in Gene Expression in Populus F1 Hybrids Genetics, December 1, 2007; 177(4): 1987 - 1996. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 R. T. Gaeta, J. C. Pires, F. Iniguez-Luy, E. Leon, and T. C. Osborn Genomic Changes in Resynthesized Brassica napus and Their Effect on Gene Expression and Phenotype PLANT CELL, November 1, 2007; 19(11): 3403 - 3417. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 D. A. Vaughan, E. Balazs, and J. S. Heslop-Harrison From Crop Domestication to Super-domestication Ann. Bot., October 1, 2007; 100(5): 893 - 901. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
R. M. Stupar, P. B. Bhaskar, B. S. Yandell, W. A. Rensink, A. L. Hart, S. Ouyang, R. E. Veilleux, J. S. Busse, R. J. Erhardt, C. R. Buell, et al. Phenotypic and Transcriptomic Changes Associated With Potato Autopolyploidization Genetics, August 1, 2007; 176(4): 2055 - 2067. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
N. M. Springer and R. M. Stupar Allele-Specific Expression Patterns Reveal Biases and Embryo-Specific Parent-of-Origin Effects in Hybrid Maize PLANT CELL, August 1, 2007; 19(8): 2391 - 2402. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
B. J. Evans Ancestry Influences the Fate of Duplicated Genes Millions of Years After Polyploidization of Clawed Frogs (Xenopus) Genetics, June 1, 2007; 176(2): 1119 - 1130. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
N. Shitsukawa, C. Tahira, K.-i. Kassai, C. Hirabayashi, T. Shimizu, S. Takumi, K. Mochida, K. Kawaura, Y. Ogihara, and K. Murai Genetic and Epigenetic Alteration among Three Homoeologous Genes of a Class E MADS Box Gene in Hexaploid Wheat PLANT CELL, June 1, 2007; 19(6): 1723 - 1737. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 K. L. Adams Evolution of Duplicate Gene Expression in Polyploid and Hybrid Plants J. Hered., March 1, 2007; 98(2): 136 - 141. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. D. Nicolas, G. L. Mignon, F. Eber, O. Coriton, H. Monod, V. Clouet, V. Huteau, A. Lostanlen, R. Delourme, B. Chalhoub, et al. Homeologous Recombination Plays a Major Role in Chromosome Rearrangements That Occur During Meiosis of Brassica napus Haploids Genetics, February 1, 2007; 175(2): 487 - 503. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. de Meaux, A. Pop, and T. Mitchell-Olds Cis-regulatory Evolution of Chalcone-Synthase Expression in the Genus Arabidopsis Genetics, December 1, 2006; 174(4): 2181 - 2202. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 J. A. Udall and J. F. Wendel Polyploidy and Crop Improvement Crop Sci., November 1, 2006; 46(Supplement_1): S-3 - S-14. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 B. C. Thomas, B. Pedersen, and M. Freeling Following tetraploidy in an Arabidopsis ancestor, genes were removed preferentially from one homeolog leaving clusters enriched in dose-sensitive genes Genome Res., July 1, 2006; 16(7): 934 - 946. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. A. Tate, Z. Ni, A.-C. Scheen, J. Koh, C. A. Gilbert, D. Lefkowitz, Z. J. Chen, P. S. Soltis, and D. E. Soltis Evolution and Expression of Homeologous Loci in Tragopogon miscellus (Asteraceae), a Recent and Reciprocally Formed Allopolyploid Genetics, July 1, 2006; 173(3): 1599 - 1611. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
W. Albertin, T. Balliau, P. Brabant, A.-M. Chevre, F. Eber, C. Malosse, and H. Thiellement Numerous and Rapid Nonstochastic Modifications of Gene Products in Newly Synthesized Brassica napus Allotetraploids Genetics, June 1, 2006; 173(2): 1101 - 1113. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A.-B. Nyberg Berglund, A. Saura, and A. Westerbergh Electrophoretic Evidence for Disomic Inheritance and Allopolyploid Origin of the Octoploid Cerastium alpinum (Caryophyllaceae) J. Hered., May 1, 2006; 97(3): 296 - 302. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. A. Udall, J. M. Swanson, K. Haller, R. A. Rapp, M. E. Sparks, J. Hatfield, Y. Yu, Y. Wu, C. Dowd, A. B. Arpat, et al. A global assembly of cotton ESTs Genome Res., March 1, 2006; 16(3): 441 - 450. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. Wang, L. Tian, H.-S. Lee, N. E. Wei, H. Jiang, B. Watson, A. Madlung, T. C. Osborn, R. W. Doerge, L. Comai, et al. Genomewide Nonadditive Gene Regulation in Arabidopsis Allotetraploids Genetics, January 1, 2006; 172(1): 507 - 517. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
K. L. Adams and J. F. Wendel Allele-Specific, Bidirectional Silencing of an Alcohol Dehydrogenase Gene in Different Organs of Interspecific Diploid Cotton Hybrids Genetics, December 1, 2005; 171(4): 2139 - 2142. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
T. Nomura, A. Ishihara, R. C. Yanagita, T. R. Endo, and H. Iwamura Three genomes differentially contribute to the biosynthesis of benzoxazinones in hexaploid wheat PNAS, November 8, 2005; 102(45): 16490 - 16495. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
P. D. Rabinowicz, R. Citek, M. A. Budiman, A. Nunberg, J. A. Bedell, N. Lakey, A. L. O'Shaughnessy, L. U. Nascimento, W. R. McCombie, and R. A. Martienssen Differential methylation of genes and repeats in land plants Genome Res., October 1, 2005; 15(10): 1431 - 1440. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y.-M. Wang, Z.-Y. Dong, Z.-J. Zhang, X.-Y. Lin, Y. Shen, D. Zhou, and B. Liu Extensive de Novo Genomic Variation in Rice Induced by Introgression From Wild Rice (Zizania latifolia Griseb.) Genetics, August 1, 2005; 170(4): 1945 - 1956. [Abstract] [Full Text] [PDF]
|
|
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
