Genetics, Vol. 164, 1419-1433, August 2003, Copyright © 2003

Identification of Trans-dominant Modifiers of Prat Expression in Drosophila melanogaster

Nicolas Malmanchea and Denise V. Clarka
a Department of Biology, University of New Brunswick, Fredericton, New Brunswick E3B 6E1, Canada

Corresponding author: Denise V. Clark, Bag Service 45111, University of New Brunswick, Fredericton, NB E3B 6E1, Canada., clarkd{at}unb.ca (E-mail)

Communicating editor: K. GOLIC

The first committed step in the purine de novo synthesis pathway is performed by amidophosphoribosyltransferase (EC 2.4.2.14) or Prat. Drosophila melanogaster Prat is an essential gene with a promoter that lacks a TATA-box and initiator element and has multiple transcription start sites with a predominant start site. To study the regulation of Prat expression in the adult eye, we used the Prat:bw reporter gene, in which the Prat coding region was replaced with the brown (bw) coding region. The pale-orange eye color of a single copy of Prat:bw prompted us to use a multicopy array of Prat:bw that was derived using P transposase mutagenesis and produces a darker-orange eye color in a bwD; st genetic background. We used a 13-copy array of Prat:bw as a tool to recover dominant EMS-induced mutations that affect the expression of the transgene. After screening 21,000 F1s for deviation from the orange eye color, we isolated 23 dominant modifiers: 21 suppressors (1 Y-linked, 5 X-linked, 4 2-linked, and 11 3-linked) and 2 enhancers (1 2-linked and 1 3-linked). Quantification of their effect on endogenous Prat gene expression, using RT-PCR in young adult fly heads, identifies a subset of modifiers that are candidates for genes involved in regulating Prat expression.





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Y. Ji and D. V. Clark
The Purine Synthesis Gene Prat2 Is Required for Drosophila Metamorphosis, as Revealed by Inverted-Repeat-Mediated RNA Interference
Genetics, March 1, 2006; 172(3): 1621 - 1631.
[Abstract] [Full Text] [PDF]