Genetics, Vol. 157, 1307-1312, March 2001, Copyright © 2001

A Targeted Gene Knockout in Drosophila

Yikang S. Ronga and Kent G. Golica
a Department of Biology, University of Utah, Salt Lake City, Utah 84112

Corresponding author: Kent G. Golic, Department of Biology, University of Utah, 257 S. 1400 East, 201 Biology Bldg., Salt Lake City, UT 84112., golic{at}bioscience.utah.edu (E-mail)

Communicating editor: R. S. HAWLEY

We previously described a method for targeted homologous recombination at the yellow gene of Drosophila melanogaster. Because only a single gene was targeted, further work was required to show whether the method could be extended to become generally useful for gene modification in Drosophila. We have now used this method to produce a knockout of the autosomal pugilist gene by homologous recombination between the endogenous locus and a 2.5-kb DNA fragment. This was accomplished solely by tracking the altered genetic linkage of an arbitrary marker gene as the targeting DNA moved from chromosome X or 2 to chromosome 3. The results indicate that this method of homologous recombination is likely to be generally useful for Drosophila gene targeting.





This article has been cited by other articles:


Home page
Proc. Natl. Acad. Sci. USAHome page
H. Dai, Y. Chen, S. Chen, Q. Mao, D. Kennedy, P. Landback, A. Eyre-Walker, W. Du, and M. Long
The evolution of courtship behaviors through the origination of a new gene in Drosophila
PNAS, May 27, 2008; 105(21): 7478 - 7483.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
J. L. Mueller, J. R. Linklater, K. Ravi Ram, T. Chapman, and M. F. Wolfner
Targeted Gene Deletion and Phenotypic Analysis of the Drosophila melanogaster Seminal Fluid Protease Inhibitor Acp62F
Genetics, March 1, 2008; 178(3): 1605 - 1614.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
H. Tran, F. Hamada, T. Schwarz-Romond, and M. Bienz
Trabid, a new positive regulator of Wnt-induced transcription with preference for binding and cleaving K63-linked ubiquitin chains
Genes & Dev., February 15, 2008; 22(4): 528 - 542.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
N. Windbichler, P. A. Papathanos, F. Catteruccia, H. Ranson, A. Burt, and A. Crisanti
Homing endonuclease mediated gene targeting in Anopheles gambiae cells and embryos
Nucleic Acids Res., September 27, 2007; 35(17): 5922 - 5933.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
K. Trowbridge, K. McKim, S. J. Brill, and J. Sekelsky
Synthetic Lethality of Drosophila in the Absence of the MUS81 Endonuclease and the DmBlm Helicase Is Associated With Elevated Apoptosis
Genetics, August 1, 2007; 176(4): 1993 - 2001.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
S. Roy, M. K. Gilbert, and C. M. Hart
Characterization of BEAF Mutations Isolated by Homologous Recombination in Drosophila
Genetics, June 1, 2007; 176(2): 801 - 813.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
K. Beumer, G. Bhattacharyya, M. Bibikova, J. K. Trautman, and D. Carroll
Efficient Gene Targeting in Drosophila With Zinc-Finger Nucleases
Genetics, April 1, 2006; 172(4): 2391 - 2403.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
C. T. Hittinger, D. L. Stern, and S. B. Carroll
Pleiotropic functions of a conserved insect-specific Hox peptide motif
Development, December 1, 2005; 132(23): 5261 - 5270.
[Abstract] [Full Text] [PDF]


Home page
J. Cell Sci.Home page
A. Spierer, C. Seum, M. Delattre, and P. Spierer
Loss of the modifiers of variegation Su(var)3-7 or HP1 impacts male X polytene chromosome morphology and dosage compensation
J. Cell Sci., November 1, 2005; 118(21): 5047 - 5057.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
S. J. Radford, E. Goley, K. Baxter, S. McMahan, and J. Sekelsky
Drosophila ERCC1 Is Required for a Subset of MEI-9-Dependent Meiotic Crossovers
Genetics, August 1, 2005; 170(4): 1737 - 1745.
[Abstract] [Full Text] [PDF]


Home page
GlycobiologyHome page
N. Haines and K. D. Irvine
Functional analysis of Drosophila {beta}1,4-N-acetlygalactosaminyltransferases
Glycobiology, April 1, 2005; 15(4): 335 - 346.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
W. J. Gong and K. G. Golic
Genomic Deletions of the Drosophila melanogaster Hsp70 Genes
Genetics, November 1, 2004; 168(3): 1467 - 1476.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
H. B. Xie and K. G. Golic
Gene Deletions by Ends-In Targeting in Drosophila melanogaster
Genetics, November 1, 2004; 168(3): 1477 - 1489.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
E. L. Beall, M. Bell, D. Georlette, and M. R. Botchan
Dm-myb mutant lethality in Drosophila is dependent upon mip130: positive and negative regulation of DNA replication
Genes & Dev., July 15, 2004; 18(14): 1667 - 1680.
[Abstract] [Full Text] [PDF]


Home page
Genome ResHome page
D. Egli, E. Hafen, and W. Schaffner
An Efficient Method to Generate Chromosomal Rearrangements by Targeted DNA Double-Strand Breaks in Drosophila melanogaster
Genome Res., July 1, 2004; 14(7): 1382 - 1393.
[Abstract] [Full Text] [PDF]


Home page
ReproductionHome page
B. Geldziler, P. Kadandale, and A. Singson
Molecular genetic approaches to studying fertilization in model systems
Reproduction, April 1, 2004; 127(4): 409 - 416.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
A. C. Groth, M. Fish, R. Nusse, and M. P. Calos
Construction of Transgenic Drosophila by Using the Site-Specific Integrase From Phage {phi}C31
Genetics, April 1, 2004; 166(4): 1775 - 1782.
[Abstract] [Full Text] [PDF]


Home page
ScienceHome page
A. J. Greenberg, J. R. Moran, J. A. Coyne, and C.-I Wu
Ecological Adaptation During Incipient Speciation Revealed by Precise Gene Replacement
Science, December 5, 2003; 302(5651): 1754 - 1757.
[Abstract] [Full Text] [PDF]


Home page
J. Neurosci.Home page
T. Elmore, R. Ignell, J. R. Carlson, and D. P. Smith
Targeted Mutation of a Drosophila Odor Receptor Defines Receptor Requirement in a Novel Class of Sensillum
J. Neurosci., October 29, 2003; 23(30): 9906 - 9912.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
T. Dolezal, M. Gazi, M. Zurovec, and P. J. Bryant
Genetic Analysis of the ADGF Multigene Family by Homologous Recombination and Gene Conversion in Drosophila
Genetics, October 1, 2003; 165(2): 653 - 666.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
H. Liu and E. Kubli
From the Cover: Sex-peptide is the molecular basis of the sperm effect in Drosophila melanogaster
PNAS, August 19, 2003; 100(17): 9929 - 9933.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
H. C. Sears, C. J. Kennedy, and P. A. Garrity
Macrophage-mediated corpse engulfment is required for normal Drosophila CNS morphogenesis
Development, August 1, 2003; 130(15): 3557 - 3565.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
J.-C. Epinat, S. Arnould, P. Chames, P. Rochaix, D. Desfontaines, C. Puzin, A. Patin, A. Zanghellini, F. Paques, and E. Lacroix
A novel engineered meganuclease induces homologous recombination in yeast and mammalian cells
Nucleic Acids Res., June 1, 2003; 31(11): 2952 - 2962.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
N. Sogame, M. Kim, and J. M. Abrams
Drosophila p53 preserves genomic stability by regulating cell death
PNAS, April 15, 2003; 100(8): 4696 - 4701.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
W. J. Gong and K. G. Golic
Ends-out, or replacement, gene targeting in Drosophila
PNAS, March 4, 2003; 100(5): 2556 - 2561.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
S. Lankenau, T. Barnickel, J. Marhold, F. Lyko, B. M. Mechler, and D.-H. Lankenau
Knockout Targeting of the Drosophila Nap1 Gene and Examination of DNA Repair Tracts in the Recombination Products
Genetics, February 1, 2003; 163(2): 611 - 623.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
S. E. Mohr and W. M. Gelbart
Using the P{wHy} Hybrid Transposable Element to Disrupt Genes in Region 54D-55B in Drosophila melanogaster
Genetics, September 1, 2002; 162(1): 165 - 176.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
C. Seum, D. Pauli, M. Delattre, Y. Jaquet, A. Spierer, and P. Spierer
Isolation of Su(var)3-7 Mutations by Homologous Recombination in Drosophila melanogaster
Genetics, July 1, 2002; 161(3): 1125 - 1136.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
M. Bibikova, M. Golic, K. G. Golic, and D. Carroll
Targeted Chromosomal Cleavage and Mutagenesis in Drosophila Using Zinc-Finger Nucleases
Genetics, July 1, 2002; 161(3): 1169 - 1175.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
Y. S. Rong, S. W. Titen, H. B. Xie, M. M. Golic, M. Bastiani, P. Bandyopadhyay, B. M. Olivera, M. Brodsky, G. M. Rubin, and K. G. Golic
Targeted mutagenesis by homologous recombination in D. melanogaster
Genes & Dev., June 15, 2002; 16(12): 1568 - 1581.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
C. R. Preston, W. Engels, and C. Flores
Efficient Repair of DNA Breaks in Drosophila: Evidence for Single-Strand Annealing and Competition With Other Repair Pathways
Genetics, June 1, 2002; 161(2): 711 - 720.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
B. Timakov, X. Liu, I. Turgut, and P. Zhang
Timing and Targeting of P-Element Local Transposition in the Male Germline Cells of Drosophila melanogaster
Genetics, March 1, 2002; 160(3): 1011 - 1022.
[Abstract] [Full Text] [PDF]