help button home button Genetics J Nutrition
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS

This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Clikeman, J. A.
Right arrow Articles by Nickoloff, J. A.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Clikeman, J. A.
Right arrow Articles by Nickoloff, J. A.
Genetics, Vol. 157, 579-589, February 2001, Copyright © 2001

Homologous Recombinational Repair of Double-Strand Breaks in Yeast Is Enhanced by MAT Heterozygosity Through yKU-Dependent and -Independent Mechanisms

Jennifer A. Clikemana, Guru Jot Khalsaa, Sandra L. Bartona, and Jac A. Nickoloffa
a Department of Molecular Genetics and Microbiology, University of New Mexico School of Medicine, Albuquerque, New Mexico 87131

Corresponding author: Jac A. Nickoloff, Department of Molecular Genetics and Microbiology, University of New Mexico School of Medicine, Albuquerque, NM 87131., jnickoloff{at}salud.unm.edu (E-mail)

Communicating editor: L. S. SYMINGTON

DNA double-strand breaks (DSBs) are repaired by homologous recombination (HR) and nonhomologous end-joining (NHEJ). NHEJ in yeast chromosomes has been observed only when HR is blocked, as in rad52 mutants or in the absence of a homologous repair template. We detected yKu70p-dependent imprecise NHEJ at a frequency of ~0.1% in HR-competent Rad+ haploid cells. Interestingly, yku70 mutation increased DSB-induced HR between direct repeats by 1.3-fold in a haploid strain and by 1.5-fold in a MAT homozygous (a/a) diploid, but yku70 had no effect on HR in a MAT heterozygous (a/{alpha}) diploid. yku70 might increase HR because it eliminates the competing precise NHEJ (religation) pathway and/or because yKu70p interferes directly or indirectly with HR. Despite the yku70-dependent increase in a/a cells, HR remained 2-fold lower than in a/{alpha} cells. Cell survival was also lower in a/a cells and correlated with the reduction in HR. These results indicate that MAT heterozygosity enhances DSB-induced HR by yKu-dependent and -independent mechanisms, with the latter mechanism promoting cell survival. Surprisingly, yku70 strains survived a DSB slightly better than wild type. We propose that this reflects enhanced HR, not by elimination of precise NHEJ since this pathway produces viable products, but by elimination of yKu-dependent interference of HR.





This article has been cited by other articles:


Home page
Nucleic Acids ResHome page
W. Y. Mansour, S. Schumacher, R. Rosskopf, T. Rhein, F. Schmidt-Petersen, F. Gatzemeier, F. Haag, K. Borgmann, H. Willers, and J. Dahm-Daphi
Hierarchy of nonhomologous end-joining, single-strand annealing and gene conversion at site-directed DNA double-strand breaks
Nucleic Acids Res., June 6, 2008; (2008) gkn347v1.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
T. J. Pohl and J. A. Nickoloff
Rad51-Independent Interchromosomal Double-Strand Break Repair by Gene Conversion Requires Rad52 but Not Rad55, Rad57, or Dmc1
Mol. Cell. Biol., February 1, 2008; 28(3): 897 - 906.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
Y.-C. Lo, K. S. Paffett, O. Amit, J. A. Clikeman, R. Sterk, M. A. Brenneman, and J. A. Nickoloff
Sgs1 regulates gene conversion tract lengths and crossovers independently of its helicase activity.
Mol. Cell. Biol., June 1, 2006; 26(11): 4086 - 4094.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
I. Callebaut, L. Malivert, A. Fischer, J.-P. Mornon, P. Revy, and J.-P. de Villartay
Cernunnos Interacts with the XRCC4{middle dot}DNA-ligase IV Complex and Is Homologous to the Yeast Nonhomologous End-joining Factor Nej1
J. Biol. Chem., May 19, 2006; 281(20): 13857 - 13860.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
A. Kegel, P. Martinez, S. D. Carter, and S. U. Astrom
Genome wide distribution of illegitimate recombination events in Kluyveromyces lactis
Nucleic Acids Res., March 20, 2006; 34(5): 1633 - 1645.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
G. Mercier, N. Berthault, N. Touleimat, F. Kepes, G. Fourel, E. Gilson, and M. Dutreix
A haploid-specific transcriptional response to irradiation in Saccharomyces cerevisiae
Nucleic Acids Res., November 30, 2005; 33(20): 6635 - 6643.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
C. Ruan, J. L. Workman, and R. T. Simpson
The DNA Repair Protein yKu80 Regulates the Function of Recombination Enhancer during Yeast Mating Type Switching
Mol. Cell. Biol., October 1, 2005; 25(19): 8476 - 8485.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
A. Malkova, M. L. Naylor, M. Yamaguchi, G. Ira, and J. E. Haber
RAD51-Dependent Break-Induced Replication Differs in Kinetics and Checkpoint Responses from RAD51-Mediated Gene Conversion
Mol. Cell. Biol., February 1, 2005; 25(3): 933 - 944.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
S. J. Radford, M. L. Boyle, C. J. Sheely, J. Graham, D. P. Haeusser, L. Zimmerman, and J. B. Keeney
Increase in Ty1 cDNA Recombination in Yeast sir4 Mutant Strains at High Temperature
Genetics, September 1, 2004; 168(1): 89 - 101.
[Abstract] [Full Text] [PDF]


Home page
Mol Cancer ResHome page
C. Allen, J. Halbrook, and J. A. Nickoloff
Interactive Competition Between Homologous Recombination and Non-Homologous End Joining
Mol. Cancer Res., October 1, 2003; 1(12): 913 - 920.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
J. E. Lowell, A. I. Roughton, V. Lundblad, and L. Pillus
Telomerase-Independent Proliferation Is Influenced by Cell Type in Saccharomyces cerevisiae
Genetics, July 1, 2003; 164(3): 909 - 921.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
X. Yu and A. Gabriel
Ku-Dependent and Ku-Independent End-Joining Pathways Lead to Chromosomal Rearrangements During Double-Strand Break Repair in Saccharomyces cerevisiae
Genetics, March 1, 2003; 163(3): 843 - 856.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
S. Palmer, E. Schildkraut, R. Lazarin, J. Nguyen, and J. A. Nickoloff
Gene conversion tracts in Saccharomyces cerevisiae can be extremely short and highly directional
Nucleic Acids Res., February 15, 2003; 31(4): 1164 - 1173.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
P. M. Kim, K. S. Paffett, J. A. Solinger, W.-D. Heyer, and J. A. Nickoloff
Spontaneous and double-strand break-induced recombination, and gene conversion tract lengths, are differentially affected by overexpression of wild-type or ATPase-defective yeast Rad54
Nucleic Acids Res., July 1, 2002; 30(13): 2727 - 2735.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
E. Karathanasis and T. E. Wilson
Enhancement of Saccharomyces cerevisiae End-Joining Efficiency by Cell Growth Stage but Not by Impairment of Recombination
Genetics, July 1, 2002; 161(3): 1015 - 1027.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
R. B. Tennyson, N. Ebran, A. E. Herrera, and J. E. Lindsley
A Novel Selection System for Chromosome Translocations in Saccharomyces cerevisiae
Genetics, April 1, 2002; 160(4): 1363 - 1373.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
M. Frank-Vaillant and S. Marcand
NHEJ regulation by mating type is exercised through a novel protein, Lif2p, essential to the Ligase IV pathway
Genes & Dev., November 15, 2001; 15(22): 3005 - 3012.
[Abstract] [Full Text] [PDF]




HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
Copyright © 2001 by the Genetics Society of America.