Genetics, Vol 147, 507-519, Copyright © 1997


INVESTIGATIONS

Genetic and Environmental Factors Affecting the de novo Appearance of the [PSI(+)] Prion in Saccharomyces cerevisiae

I. L. Derkatch, M. E. Bradley, P. Zhou, Y. O. Chernoff and S. W. Liebman
Laboratory for Molecular Biology, Department of Biological Sciences, University of Illinois at Chicago, Chicago, Illinois 60607

It has previously been shown that yeast prion [PSI(+)] is cured by GuHCl, although reports on reversibility of curing were contradictory. Here we show that GuHCl treatment of both [PSI(+)] and [psi(-)] yeast strains results in two classes of [psi(-)] derivatives: Pin(+), in which [PSI(+)] can be reinduced by Sup35p overproduction, and Pin(-), in which overexpression of the complete SUP35 gene does not lead to the [PSI(+)] appearance. However, in both Pin(+) and Pin(-) derivatives [PSI(+)] is reinduced by overproduction of a short Sup35p N-terminal fragment, thus, in principle, [PSI(+)] curing remains reversible in both cases. Neither suppression nor growth inhibition caused by SUP35 overexpression in Pin(+) [psi(-)] derivatives are observed in Pin(-) [psi(-)] derivatives. Genetic analyses show that the Pin(+) phenotype is determined by a non-Mendelian factor, which, unlike the [PSI(+)] prion, is independent of the Sup35p N-terminal domain. A Pin(-) [psi(-)] derivative was also generated by transient inactivation of the heat shock protein, Hsp104, while [PSI(+)] curing by Hsp104 overproduction resulted exclusively in Pin(+) [psi(-)] derivatives. We hypothesize that in addition to the [PSI(+)] prion-determining domain in the Sup35p N-terminus, there is another self-propagating conformational determinant in the C-proximal part of Sup35p and that this second prion is responsible for the Pin(+) phenotype.


This article has been cited by other articles:


Home page
GeneticsHome page
D. Sharma and D. C. Masison
Functionally Redundant Isoforms of a Yeast Hsp70 Chaperone Subfamily Have Different Antiprion Effects
Genetics, July 1, 2008; 179(3): 1301 - 1311.
[Abstract] [Full Text] [PDF]


Home page
Mol. Biol. CellHome page
S. N. Bagriantsev, E. O. Gracheva, J. E. Richmond, and S. W. Liebman
Variant-specific [PSI+] Infection Is Transmitted by Sup35 Polymers within [PSI+] Aggregates with Heterogeneous Protein Composition
Mol. Biol. Cell, June 1, 2008; 19(6): 2433 - 2443.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
I. M. Alexandrov, A. B. Vishnevskaya, M. D. Ter-Avanesyan, and V. V. Kushnirov
Appearance and Propagation of Polyglutamine-based Amyloids in Yeast: TYROSINE RESIDUES ENABLE POLYMER FRAGMENTATION
J. Biol. Chem., May 30, 2008; 283(22): 15185 - 15192.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
P. M. Douglas, S. Treusch, H.-Y. Ren, R. Halfmann, M. L. Duennwald, S. Lindquist, and D. M. Cyr
Chaperone-dependent amyloid assembly protects cells from prion toxicity
PNAS, May 20, 2008; 105(20): 7206 - 7211.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
H. Kurahashi, M. Ishiwata, S. Shibata, and Y. Nakamura
A Regulatory Role of the Rnq1 Nonprion Domain for Prion Propagation and Polyglutamine Aggregates
Mol. Cell. Biol., May 15, 2008; 28(10): 3313 - 3323.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
R. B. Wickner, F. Dyda, and R. Tycko
Amyloid of Rnq1p, the basis of the [PIN+] prion, has a parallel in-register {beta}-sheet structure
PNAS, February 19, 2008; 105(7): 2403 - 2408.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
N. Makarava, C.-I Lee, V. G. Ostapchenko, and I. V. Baskakov
Highly Promiscuous Nature of Prion Polymerization
J. Biol. Chem., December 14, 2007; 282(50): 36704 - 36713.
[Abstract] [Full Text] [PDF]


Home page
Mol. Biol. CellHome page
L. Malato, S. Dos Reis, L. Benkemoun, R. Sabate, and S. J. Saupe
Role of Hsp104 in the Propagation and Inheritance of the [Het-s] Prion
Mol. Biol. Cell, December 1, 2007; 18(12): 4803 - 4812.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
Q. Fan, K.-W. Park, Z. Du, K. A. Morano, and L. Li
The Role of Sse1 in the de Novo Formation and Variant Determination of the [PSI+] Prion
Genetics, November 1, 2007; 177(3): 1583 - 1593.
[Abstract] [Full Text] [PDF]


Home page
Am. J. Pathol.Home page
J. Yan, X. Fu, F. Ge, B. Zhang, J. Yao, H. Zhang, J. Qian, H. Tomozawa, H. Naiki, J. Sawashita, et al.
Cross-Seeding and Cross-Competition in Mouse Apolipoprotein A-II Amyloid Fibrils and Protein A Amyloid Fibrils
Am. J. Pathol., July 1, 2007; 171(1): 172 - 180.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
B. Chen, G. P. Newnam, and Y. O. Chernoff
Prion species barrier between the closely related yeast proteins is detected despite coaggregation
PNAS, February 20, 2007; 104(8): 2791 - 2796.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
K. D. Allen, T. A. Chernova, E. P. Tennant, K. D. Wilkinson, and Y. O. Chernoff
Effects of Ubiquitin System Alterations on the Formation and Loss of a Yeast Prion
J. Biol. Chem., February 2, 2007; 282(5): 3004 - 3013.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
H. M. Loovers, E. Guinan, and G. W. Jones
Importance of the Hsp70 ATPase Domain in Yeast Prion Propagation
Genetics, February 1, 2007; 175(2): 621 - 630.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
Y. A. Vitrenko, E. O. Gracheva, J. E. Richmond, and S. W. Liebman
Visualization of Aggregation of the Rnq1 Prion Domain and Cross-seeding Interactions with Sup35NM
J. Biol. Chem., January 19, 2007; 282(3): 1779 - 1787.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
F. Shewmaker, R. B. Wickner, and R. Tycko
Amyloid of the prion domain of Sup35p has an in-register parallel beta-sheet structure
PNAS, December 26, 2006; 103(52): 19754 - 19759.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
G.-C. Hung and D. C. Masison
N-Terminal Domain of Yeast Hsp104 Chaperone Is Dispensable for Thermotolerance and Prion Propagation but Necessary for Curing Prions by Hsp104 Overexpression
Genetics, June 1, 2006; 173(2): 611 - 620.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
E. E. Ganusova, L. N. Ozolins, S. Bhagat, G. P. Newnam, R. D. Wegrzyn, M. Y. Sherman, and Y. O. Chernoff
Modulation of Prion Formation, Aggregation, and Toxicity by the Actin Cytoskeleton in Yeast
Mol. Cell. Biol., January 15, 2006; 26(2): 617 - 629.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
Y.-X. Wu, L. E. Greene, D. C. Masison, and E. Eisenberg
Curing of yeast [PSI+] prion by guanidine inactivation of Hsp104 does not require cell division
PNAS, September 6, 2005; 102(36): 12789 - 12794.
[Abstract] [Full Text] [PDF]


Home page
Protein Sci.Home page
C.-Y. Chen, K. Rojanatavorn, A. C. Clark, and J. C.H. Shih
Characterization and enzymatic degradation of Sup35NM, a yeast prion-like protein
Protein Sci., September 1, 2005; 14(9): 2228 - 2235.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
T. Nakayashiki, C. P. Kurtzman, H. K. Edskes, and R. B. Wickner
Yeast prions [URE3] and [PSI+] are diseases
PNAS, July 26, 2005; 102(30): 10575 - 10580.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
K. C. Gokhale, G. P. Newnam, M. Y. Sherman, and Y. O. Chernoff
Modulation of Prion-dependent Polyglutamine Aggregation and Toxicity by Chaperone Proteins in the Yeast Model
J. Biol. Chem., June 17, 2005; 280(24): 22809 - 22818.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
A. B. Salnikova, D. S. Kryndushkin, V. N. Smirnov, V. V. Kushnirov, and M. D. Ter-Avanesyan
Nonsense Suppression in Yeast Cells Overproducing Sup35 (eRF3) Is Caused by Its Non-heritable Amyloids
J. Biol. Chem., March 11, 2005; 280(10): 8808 - 8812.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
K. D. Allen, R. D. Wegrzyn, T. A. Chernova, S. Muller, G. P. Newnam, P. A. Winslett, K. B. Wittich, K. D. Wilkinson, and Y. O. Chernoff
Hsp70 Chaperones as Modulators of Prion Life Cycle: Novel Effects of Ssa and Ssb on the Saccharomyces cerevisiae Prion [PSI+]
Genetics, March 1, 2005; 169(3): 1227 - 1242.
[Abstract] [Full Text] [PDF]


Home page
Eukaryot CellHome page
Y. Song, Y.-x. Wu, G. Jung, Y. Tutar, E. Eisenberg, L. E. Greene, and D. C. Masison
Role for Hsp70 Chaperone in Saccharomyces cerevisiae Prion Seed Replication
Eukaryot. Cell, February 1, 2005; 4(2): 289 - 297.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
S. Bagriantsev and S. W. Liebman
Specificity of Prion Assembly in Vivo: [PSI+] AND [PIN+] FORM SEPARATE STRUCTURES IN YEAST
J. Biol. Chem., December 3, 2004; 279(49): 51042 - 51048.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
I. L. Derkatch, S. M. Uptain, T. F. Outeiro, R. Krishnan, S. L. Lindquist, and S. W. Liebman
Effects of Q/N-rich, polyQ, and non-polyQ amyloids on the de novo formation of the [PSI+] prion in yeast and aggregation of Sup35 in vitro
PNAS, August 31, 2004; 101(35): 12934 - 12939.
[Abstract] [Full Text] [PDF]


Home page
GENES CELLSHome page
Y. Kimura, S. Koitabashi, A. Kakizuka, and T. Fujita
The role of pre-existing aggregates in Hsp104-dependent polyglutamine aggregate formation and epigenetic change of yeast prions
Genes Cells, August 1, 2004; 9(8): 685 - 696.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
R. B. Wickner, H. K. Edskes, B. T. Roberts, U. Baxa, M. M. Pierce, E. D. Ross, and A. Brachmann
Prions: proteins as genes and infectious entities
Genes & Dev., March 1, 2004; 18(5): 470 - 485.
[Full Text] [PDF]


Home page
J. Biol. Chem.Home page
V. Grimminger, K. Richter, A. Imhof, J. Buchner, and S. Walter
The Prion Curing Agent Guanidinium Chloride Specifically Inhibits ATP Hydrolysis by Hsp104
J. Biol. Chem., February 27, 2004; 279(9): 7378 - 7383.
[Abstract] [Full Text] [PDF]


Home page
J. Cell Sci.Home page
P. Collin, P. B. Beauregard, A. Elagoz, and L. A. Rokeach
A non-chromosomal factor allows viability of Schizosaccharomyces pombe lacking the essential chaperone calnexin
J. Cell Sci., February 22, 2004; 117(6): 907 - 918.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
M. E. Bradley and S. W. Liebman
Destabilizing Interactions Among [PSI+] and [PIN+] Yeast Prion Variants
Genetics, December 1, 2003; 165(4): 1675 - 1685.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
B. Cox, F. Ness, and M. Tuite
Analysis of the Generation and Segregation of Propagons: Entities That Propagate the [PSI+] Prion in Yeast
Genetics, September 1, 2003; 165(1): 23 - 33.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
B.T. Roberts and R. B. Wickner
Heritable activity: a prion that propagates by covalent autoactivation
Genes & Dev., September 1, 2003; 17(17): 2083 - 2087.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
N. Fay, Y. Inoue, L. Bousset, H. Taguchi, and R. Melki
Assembly of the Yeast Prion Ure2p into Protein Fibrils: THERMODYNAMIC AND KINETIC CHARACTERIZATION
J. Biol. Chem., August 8, 2003; 278(32): 30199 - 30205.
[Abstract] [Full Text] [PDF]


Home page
Mol. Biol. CellHome page
A. Baudin-Baillieu, E. Fernandez-Bellot, F. Reine, E. Coissac, and C. Cullin
Conservation of the Prion Properties of Ure2p through Evolution
Mol. Biol. Cell, August 1, 2003; 14(8): 3449 - 3458.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
G. W. Jones and D. C. Masison
Saccharomyces cerevisiae Hsp70 Mutations Affect [PSI+] Prion Propagation and Cell Growth Differently and Implicate Hsp40 and Tetratricopeptide Repeat Cochaperones in Impairment of [PSI+]
Genetics, February 1, 2003; 163(2): 495 - 506.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
F. Ness, P. Ferreira, B. S. Cox, and M. F. Tuite
Guanidine Hydrochloride Inhibits the Generation of Prion "Seeds" but Not Prion Protein Aggregation in Yeast
Mol. Cell. Biol., August 1, 2002; 22(15): 5593 - 5605.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
D. Lockshon
A Heritable Structural Alteration of the Yeast Mitochondrion
Genetics, August 1, 2002; 161(4): 1425 - 1435.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
S. W. Liebman
Progress toward an ultimate proof of the prion hypothesis
PNAS, July 9, 2002; 99(14): 9098 - 9100.
[Full Text] [PDF]


Home page
J. Cell Biol.Home page
A. B. Meriin, X. Zhang, X. He, G. P. Newnam, Y. O. Chernoff, and M. Y. Sherman
Huntingtin toxicity in yeast model depends on polyglutamine aggregation mediated by a prion-like protein Rnq1
J. Cell Biol., June 10, 2002; 157(6): 997 - 1004.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
B. Cosson, A. Couturier, S. Chabelskaya, D. Kiktev, S. Inge-Vechtomov, M. Philippe, and G. Zhouravleva
Poly(A)-Binding Protein Acts in Translation Termination via Eukaryotic Release Factor 3 Interaction and Does Not Influence [PSI+] Propagation
Mol. Cell. Biol., May 15, 2002; 22(10): 3301 - 3315.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
K. V. Volkov, A. Yu. Aksenova, M. J. Soom, K. V. Osipov, A. V. Svitin, C. Kurischko, I. S. Shkundina, M. D. Ter-Avanesyan, S. G. Inge-Vechtomov, and L. N. Mironova
Novel Non-Mendelian Determinant Involved in the Control of Translation Accuracy in Saccharomyces cerevisiae
Genetics, January 1, 2002; 160(1): 25 - 36.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
M. Schlumpberger, S. B. Prusiner, and I. Herskowitz
Induction of Distinct [URE3] Yeast Prion Strains
Mol. Cell. Biol., October 15, 2001; 21(20): 7035 - 7046.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
R. D. Wegrzyn, K. Bapat, G. P. Newnam, A. D. Zink, and Y. O. Chernoff
Mechanism of Prion Loss after Hsp104 Inactivation in Yeast
Mol. Cell. Biol., July 15, 2001; 21(14): 4656 - 4669.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
H. Moriyama, H. K. Edskes, and R. B. Wickner
[URE3] Prion Propagation in Saccharomyces cerevisiae: Requirement for Chaperone Hsp104 and Curing by Overexpressed Chaperone Ydj1p
Mol. Cell. Biol., December 1, 2000; 20(23): 8916 - 8922.
[Abstract] [Full Text]


Home page
Mol. Cell. Biol.Home page
A. Chacinska, M. Boguta, J. Krzewska, and S. Rospert
Prion-Dependent Switching between Respiratory Competence and Deficiency in the Yeast nam9-1 Mutant
Mol. Cell. Biol., October 1, 2000; 20(19): 7220 - 7229.
[Abstract] [Full Text]


Home page
ScienceHome page
H. E. Sparrer, A. Santoso, F. C. Szoka Jr., and J. S. Weissman
Evidence for the Prion Hypothesis: Induction of the Yeast [PSI+] Factor by in Vitro- Converted Sup35 Protein
Science, July 28, 2000; 289(5479): 595 - 599.
[Abstract] [Full Text]


Home page
Microbiol. Mol. Biol. Rev.Home page
R. B. Wickner, K. L. Taylor, H. K. Edskes, M.-L. Maddelein, H. Moriyama, and B. T. Roberts
Prions in Saccharomyces and Podospora spp.: Protein-Based Inheritance
Microbiol. Mol. Biol. Rev., December 1, 1999; 63(4): 844 - 861.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
Y. O. Chernoff, G. P. Newnam, J. Kumar, K. Allen, and A. D. Zink
Evidence for a Protein Mutator in Yeast: Role of the Hsp70-Related Chaperone Ssb in Formation, Stability, and Toxicity of the [PSI] Prion
Mol. Cell. Biol., December 1, 1999; 19(12): 8103 - 8112.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
P. A. Bailleul, G. P. Newnam, J. N. Steenbergen, and Y. O. Chernoff
Genetic Study of Interactions Between the Cytoskeletal Assembly Protein Sla1 and Prion-Forming Domain of the Release Factor Sup35 (eRF3) in Saccharomyces cerevisiae
Genetics, September 1, 1999; 153(1): 81 - 94.
[Abstract] [Full Text]


Home page
Mol. Cell. Biol.Home page
G. P. Newnam, R. D. Wegrzyn, S. L. Lindquist, and Y. O. Chernoff
Antagonistic Interactions between Yeast Chaperones Hsp104 and Hsp70 in Prion Curing
Mol. Cell. Biol., February 1, 1999; 19(2): 1325 - 1333.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
S. W. Liebman and I. L. Derkatch
The Yeast [PSI+] Prion: Making Sense of Nonsense
J. Biol. Chem., January 15, 1999; 274(3): 1181 - 1184.
[Full Text] [PDF]


Home page
GeneticsHome page
Z. Tallóczy, S. Menon, L. Neigeborn, and M. J. Leibowitz
The [KIL-d] Cytoplasmic Genetic Element of Yeast Results in Epigenetic Regulation of Viral M Double-Stranded RNA Gene Expression
Genetics, September 1, 1998; 150(1): 21 - 30.
[Abstract] [Full Text]


Home page
Proc. Natl. Acad. Sci. USAHome page
I. L. Derkatch, M. E. Bradley, and S. W. Liebman
Overexpression of the SUP45 gene encoding a Sup35p-binding protein inhibits the induction of the de novo appearance of the [PSI+] prion
PNAS, March 3, 1998; 95(5): 2400 - 2405.
[Abstract] [Full Text] [PDF]