Genetics, Vol 132, 737-753, Copyright © 1992


INVESTIGATIONS

Analysis of Subtelomeric Heterochromatin in the Drosophila Minichromosome Dp1187 by Single P Element Insertional Mutagenesis

G. H. Karpen and A. C. Spradling
Current address: Molecular Biology and Virology Laboratory, The Salk Institute, 10010 North Torrey Pines Road, La Jolla, California 92037.

We investigated whether single P element insertional mutagenesis could be used to analyze heterochromatin within the Drosophila minichromosome Dp1187. Forty-five insertions of the P[lacZ,rosy(+)] element onto Dp1187 (recovered among 7,825 transpositions) were highly clustered. None was recovered in centromeric heterochromatin, but 39 occurred about 40 kb from the distal telomere within a 4.7-kb hotspot containing tandem copies of a novel 1.8-kb repetitive DNA sequence. The DNA within and distal to this region lacked essential genes and displayed several other properties characteristic of heterochromatin. The rosy(+) genes within the inserted transposons were inhibited by position-effect variegation, and the subtelomeric region was underrepresented in polytene salivary gland cells. These experiments demonstrated that P elements preferentially transpose into a small subset of heterochromatic sites, providing a versatile method for studying the structure and function of these chromosome regions. This approach revealed that a Drosophila chromosome contains a large region of subtelomeric heterochromatin with specific structural and genetic properties.


This article has been cited by other articles:


Home page
GeneticsHome page
R. C. Frydrychova, J. M. Mason, and T. K. Archer
HP1 Is Distributed Within Distinct Chromatin Domains at Drosophila Telomeres
Genetics, September 1, 2008; 180(1): 121 - 131.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
A. D. Kern and D. J. Begun
Recurrent Deletion and Gene Presence/Absence Polymorphism: Telomere Dynamics Dominate Evolution at the Tip of 3L in Drosophila melanogaster and D. simulans
Genetics, June 1, 2008; 179(2): 1021 - 1027.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
J. A. Anderson, Y. S. Song, and C. H. Langley
Molecular Population Genetics of Drosophila Subtelomeric DNA
Genetics, January 1, 2008; 178(1): 477 - 487.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
R. C. Frydrychova, H. Biessmann, A. Y. Konev, M. D. Golubovsky, J. Johnson, T. K. Archer, and J. M. Mason
Transcriptional Activity of the Telomeric Retrotransposon HeT-A in Drosophila melanogaster Is Stimulated as a Consequence of Subterminal Deficiencies at Homologous and Nonhomologous Telomeres
Mol. Cell. Biol., July 1, 2007; 27(13): 4991 - 5001.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
E. Assa-Kunik, I. L. Torres, E. D. Schejter, D. S. Johnston, and B.-Z. Shilo
Drosophila follicle cells are patterned by multiple levels of Notch signaling and antagonism between the Notch and JAK/STAT pathways
Development, March 15, 2007; 134(6): 1161 - 1169.
[Abstract] [Full Text] [PDF]


Home page
Genome ResHome page
H. M. Robertson and K. H.J. Gordon
Canonical TTAGG-repeat telomeres and telomerase in the honey bee, Apis mellifera
Genome Res., November 1, 2006; 16(11): 1345 - 1351.
[Abstract] [Full Text] [PDF]


Home page
Genome ResHome page
J. A. George, P. G. DeBaryshe, K. L. Traverse, S. E. Celniker, and M.-L. Pardue
Genomic organization of the Drosophila telomere retrotransposable elements
Genome Res., October 1, 2006; 16(10): 1231 - 1240.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
A. Tulin, N. M. Naumova, A. K. Menon, and A. C. Spradling
Drosophila Poly(ADP-Ribose) Glycohydrolase Mediates Chromatin Structure and SIR2-Dependent Silencing
Genetics, January 1, 2006; 172(1): 363 - 371.
[Abstract] [Full Text] [PDF]


Home page
J. Cell Sci.Home page
E. N. Andreyeva, E. S. Belyaeva, V. F. Semeshin, G. V. Pokholkova, and I. F. Zhimulev
Three distinct chromatin domains in telomere ends of polytene chromosomes in Drosophila melanogaster Tel mutants
J. Cell Sci., December 1, 2005; 118(23): 5465 - 5477.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
H. Biessmann, S. Prasad, V. F. Semeshin, E. N. Andreyeva, Q. Nguyen, M. F. Walter, and J. M. Mason
Two Distinct Domains in Drosophila melanogaster Telomeres
Genetics, December 1, 2005; 171(4): 1767 - 1777.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
A. Metaxakis, S. Oehler, A. Klinakis, and C. Savakis
Minos as a Genetic and Genomic Tool in Drosophila melanogaster
Genetics, October 1, 2005; 171(2): 571 - 581.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
K. J. Haley, J. R. Stuart, J. D. Raymond, J. B. Niemi, and M. J. Simmons
Impairment of Cytotype Regulation of P-Element Activity in Drosophila melanogaster by Mutations in the Su(var)205 Gene
Genetics, October 1, 2005; 171(2): 583 - 595.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
M. Muzzopappa and P. Wappner
Multiple roles of the F-box protein Slimb in Drosophila egg chamber development
Development, June 1, 2005; 132(11): 2561 - 2571.
[Abstract] [Full Text] [PDF]


Home page
GENES CELLSHome page
S. Layalle, E. Coessens, A. Ghysen, and C. Dambly-Chaudiere
Smooth, a hnRNP encoding gene, controls axonal navigation in Drosophila
Genes Cells, February 1, 2005; 10(2): 119 - 125.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
J. C. Adam and D. J. Montell
A role for extra macrochaetae downstream of Notch in follicle cell differentiation
Development, December 1, 2004; 131(23): 5971 - 5980.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
T. D. Tayler, M. B. Robichaux, and P. A. Garrity
Compartmentalization of visual centers in the Drosophila brain requires Slit and Robo proteins
Development, December 1, 2004; 131(23): 5935 - 5945.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
J. M. Mason, J. Ransom, and A. Y. Konev
A Deficiency Screen for Dominant Suppressors of Telomeric Silencing in Drosophila
Genetics, November 1, 2004; 168(3): 1353 - 1370.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
M. Angulo, M. Corominas, and F. Serras
Activation and repression activities of ash2 in Drosophila wing imaginal discs
Development, October 15, 2004; 131(20): 4943 - 4953.
[Abstract] [Full Text] [PDF]


Home page
Mol Biol EvolHome page
J. P. Abad, B. de Pablos, K. Osoegawa, P. J. de Jong, A. Martin-Gallardo, and A. Villasante
Genomic Analysis of Drosophila melanogaster Telomeres: Full-length Copies of HeT-A and TART Elements at Telomeres
Mol. Biol. Evol., September 1, 2004; 21(9): 1613 - 1619.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
S. R. Oikemus, N. McGinnis, J. Queiroz-Machado, H. Tukachinsky, S. Takada, C. E. Sunkel, and M. H. Brodsky
Drosophila atm/telomere fusion is required for telomeric localization of HP1 and telomere position effect
Genes & Dev., August 1, 2004; 18(15): 1850 - 1861.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
H. J. Bellen, R. W. Levis, G. Liao, Y. He, J. W. Carlson, G. Tsang, M. Evans-Holm, P. R. Hiesinger, K. L. Schulze, G. M. Rubin, et al.
The BDGP Gene Disruption Project: Single Transposon Insertions Associated With 40% of Drosophila Genes
Genetics, June 1, 2004; 167(2): 761 - 781.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
A. Y. Konev, C. M. Yan, D. Acevedo, C. Kennedy, E. Ward, A. Lim, S. Tickoo, and G. H. Karpen
Genetics of P-Element Transposition Into Drosophila melanogaster Centric Heterochromatin
Genetics, December 1, 2003; 165(4): 2039 - 2053.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
G. E. Carney and B. J. Taylor
logjam Encodes a Predicted EMP24/GP25 Protein That Is Required for Drosophila Oviposition Behavior
Genetics, May 1, 2003; 164(1): 173 - 186.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
A. Boivin, C. Gally, S. Netter, D. Anxolabehere, and S. Ronsseray
Telomeric Associated Sequences of Drosophila Recruit Polycomb-Group Proteins in Vivo and Can Induce Pairing-Sensitive Repression
Genetics, May 1, 2003; 164(1): 195 - 208.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
R. T. Cox and A. C. Spradling
A Balbiani body and the fusome mediate mitochondrial inheritance during Drosophila oogenesis
Development, April 15, 2003; 130(8): 1579 - 1590.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
T. Kai and A. Spradling
An empty Drosophila stem cell niche reactivates the proliferation of ectopic cells
PNAS, April 15, 2003; 100(8): 4633 - 4638.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
A. Hong, S. Lee-Kong, T. Iida, I. Sugimura, and M. A. Lilly
The p27cip/kip ortholog dacapo maintains the Drosophila oocyte in prophase of meiosis I
Development, April 1, 2003; 130(7): 1235 - 1242.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
E. Casacuberta and M.-L. Pardue
Transposon telomeres are widely distributed in the Drosophila genus: TART elements in the virilis group
PNAS, March 18, 2003; 100(6): 3363 - 3368.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
J. M. Mason, A. Y. Konev, M. D. Golubovsky, and H. Biessmann
Cis- and trans-acting Influences on Telomeric Position Effect in Drosophila melanogaster Detected With a Subterminal Transgene
Genetics, March 1, 2003; 163(3): 917 - 930.
[Abstract] [Full Text] [PDF]


Home page
Genome ResHome page
X. Sun, H. D. Le, J. M. Wahlstrom, and G. H. Karpen
Sequence Analysis of a Functional Drosophila Centromere
Genome Res., February 1, 2003; 13(2): 182 - 194.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
J. A. George and M.-L. Pardue
The Promoter of the Heterochromatic Drosophila Telomeric Retrotransposon, HeT-A, Is Active When Moved Into Euchromatic Locations
Genetics, February 1, 2003; 163(2): 625 - 635.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
S.-W. Oh, T. Kingsley, H.-h. Shin, Z. Zheng, H.-W. Chen, X. Chen, H. Wang, P. Ruan, M. Moody, and S. X. Hou
A P-Element Insertion Screen Identified Mutations in 455 Novel Essential Genes in Drosophila
Genetics, January 1, 2003; 163(1): 195 - 201.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
J. R. Stuart, K. J. Haley, D. Swedzinski, S. Lockner, P. E. Kocian, P. J. Merriman, and M. J. Simmons
Telomeric P elements Associated With Cytotype Regulation of the P Transposon Family in Drosophila melanogaster
Genetics, December 1, 2002; 162(4): 1641 - 1654.
[Abstract] [Full Text] [PDF]


Home page
J. Neurosci.Home page
M. Nakamura, D. Baldwin, S. Hannaford, J. Palka, and C. Montell
Defective Proboscis Extension Response (DPR), a Member of the Ig Superfamily Required for the Gustatory Response to Salt
J. Neurosci., May 1, 2002; 22(9): 3463 - 3472.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
C. M. Yan, K. W. Dobie, H. D. Le, A. Y. Konev, and G. H. Karpen
Efficient Recovery of Centric Heterochromatin P-Element Insertions in Drosophila melanogaster
Genetics, May 1, 2002; 161(1): 217 - 229.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
H.-W. Chen, M. J. Marinissen, S.-W. Oh, X. Chen, M. Melnick, N. Perrimon, J. S. Gutkind, and S. X. Hou
CKA, a Novel Multidomain Protein, Regulates the JUN N-Terminal Kinase Signal Transduction Pathway in Drosophila
Mol. Cell. Biol., March 15, 2002; 22(6): 1792 - 1803.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
K. M. Donaldson, A. Lui, and G. H. Karpen
Modifiers of Terminal Deficiency-Associated Position Effect Variegation in Drosophila
Genetics, March 1, 2002; 160(3): 995 - 1009.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
Y. Sedaghat, W. F. Miranda, and M. J. Sonnenfeld
The jing Zn-finger transcription factor is a mediator of cellular differentiation in the Drosophila CNS midline and trachea
Development, January 6, 2002; 129(11): 2591 - 2606.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
J. R. McGregor, R. Xi, and D. A. Harrison
JAK signaling is somatically required for follicle cell differentiation in Drosophila
Development, January 2, 2002; 129(3): 705 - 717.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
S. Ronsseray, A. Boivin, and D. Anxolabehere
P-Element Repression in Drosophila melanogaster by Variegating Clusters of P-lacZ-white Transgenes
Genetics, December 1, 2001; 159(4): 1631 - 1642.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
C. Dossenbach, S. Rock, and M. Affolter
Specificity of FGF signaling in cell migration in Drosophila
Development, November 15, 2001; 128(22): 4563 - 4572.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
A. M. Volpe, H. Horowitz, C. M. Grafer, S. M. Jackson, and C. A. Berg
Drosophila rhino Encodes a Female-Specific Chromo-domain Protein That Affects Chromosome Structure and Egg Polarity
Genetics, November 1, 2001; 159(3): 1117 - 1134.
[Abstract] [Full Text] [PDF]


Home page
J. Cell Biol.Home page
B. Sullivan and G. Karpen
Centromere identity in Drosophila is not determined in vivo by replication timing
J. Cell Biol., August 20, 2001; 154(4): 683 - 690.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
K. A. Maggert and G. H. Karpen
The Activation of a Neocentromere in Drosophila Requires Proximity to an Endogenous Centromere
Genetics, August 1, 2001; 158(4): 1615 - 1628.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
S. Szuplewski and R. Terracol
The cyclope Gene of Drosophila Encodes a Cytochrome c Oxidase Subunit VIc Homolog
Genetics, August 1, 2001; 158(4): 1629 - 1643.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
M. D. Golubovsky, A. Y. Konev, M. F. Walter, H. Biessmann, and J. M. Mason
Terminal Retrotransposons Activate a Subtelomeric white Transgene at the 2L Telomere in Drosophila
Genetics, July 1, 2001; 158(3): 1111 - 1123.
[Abstract] [Full Text] [PDF]


Home page
Mol. Biol. CellHome page
M. M. Shareef, C. King, M. Damaj, R. Badagu, D. W. Huang, and R. Kellum
Drosophila Heterochromatin Protein 1 (HP1)/Origin Recognition Complex (ORC) Protein Is Associated with HP1 and ORC and Functions in Heterochromatin-induced Silencing
Mol. Biol. Cell, June 1, 2001; 12(6): 1671 - 1685.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
J. E. Tomkiel, B. T. Wakimoto, and A. Briscoe , Jr.
The teflon Gene Is Required for Maintenance of Autosomal Homolog Pairing at Meiosis I in Male Drosophila melanogaster
Genetics, January 1, 2001; 157(1): 273 - 281.
[Abstract] [Full Text]


Home page
GeneticsHome page
J. Gates and C. S. Thummel
An Enhancer Trap Screen for Ecdysone-Inducible Genes Required for Drosophila Adult Leg Morphogenesis
Genetics, December 1, 2000; 156(4): 1765 - 1776.
[Abstract] [Full Text]


Home page
Mol. Cell. Biol.Home page
T. J. Leach, H. L. Chotkowski, M. G. Wotring, R. L. Dilwith, and R. L. Glaser
Replication of Heterochromatin and Structure of Polytene Chromosomes
Mol. Cell. Biol., September 1, 2000; 20(17): 6308 - 6316.
[Abstract] [Full Text]


Home page
GeneticsHome page
L. Marin, M. Lehmann, D. Nouaud, H. Izaabel, D. Anxolabéhère, and S. Ronsseray
P-Element Repression in Drosophila melanogaster by a Naturally Occurring Defective Telomeric P Copy
Genetics, August 1, 2000; 155(4): 1841 - 1854.
[Abstract] [Full Text]


Home page
GeneticsHome page
P. Yang, S. A. Shaver, A. J. Hilliker, and M. B. Sokolowski
Abnormal Turning Behavior in Drosophila Larvae: Identification and Molecular Analysis of scribbler (sbb)
Genetics, July 1, 2000; 155(3): 1161 - 1174.
[Abstract] [Full Text]


Home page
Genes Dev.Home page
T. Hummel, K. Leifker, and C. Klämbt
The Drosophila HEM-2/NAP1 homolog KETTE controls axonal pathfinding and cytoskeletal organization
Genes & Dev., April 1, 2000; 14(7): 863 - 873.
[Abstract] [Full Text]


Home page
GeneticsHome page
R. Mottus, R. E. Sobel, and T. A. Grigliatti
Mutational Analysis of a Histone Deacetylase in Drosophila melanogaster: Missense Mutations Suppress Gene Silencing Associated With Position Effect Variegation
Genetics, February 1, 2000; 154(2): 657 - 668.
[Abstract] [Full Text]


Home page
ScienceHome page
J. Montagne, M. J. Stewart, H. Stocker, E. Hafen, S. C. Kozma, and G. Thomas
Drosophila S6 Kinase: A Regulator of Cell Size
Science, September 24, 1999; 285(5436): 2126 - 2129.
[Abstract] [Full Text]


Home page
GeneticsHome page
A. C. Spradling, D. Stern, A. Beaton, E. J. Rhem, T. Laverty, N. Mozden, S. Misra, and G. M. Rubin
The Berkeley Drosophila Genome Project Gene Disruption Project: Single P-Element Insertions Mutating 25% of Vital Drosophila Genes
Genetics, September 1, 1999; 153(1): 135 - 177.
[Abstract] [Full Text]


Home page
GeneticsHome page
K. Ahmad and K. G. Golic
Telomere Loss in Somatic Cells of Drosophila Causes Cell Cycle Arrest and Apoptosis
Genetics, March 1, 1999; 151(3): 1041 - 1051.
[Abstract] [Full Text]


Home page
DevelopmentHome page
I Zinke, C Kirchner, L. Chao, M. Tetzlaff, and M. Pankratz
Suppression of food intake and growth by amino acids in Drosophila: the role of pumpless, a fat body expressed gene with homology to vertebrate glycine cleavage system
Development, January 12, 1999; 126(23): 5275 - 5284.
[Abstract] [PDF]


Home page
DevelopmentHome page
M Vazquez, L Moore, and J. Kennison
The trithorax group gene osa encodes an ARID-domain protein that genetically interacts with the brahma chromatin-remodeling factor to regulate transcription
Development, January 2, 1999; 126(4): 733 - 742.
[Abstract] [PDF]


Home page
GeneticsHome page
M. V. Frolov and J. A. Birchler
Mutation in P0, a Dual Function Ribosomal Protein/Apurinic/Apyrimidinic Endonuclease, Modifies Gene Expression and Position Effect Variegation in Drosophila
Genetics, December 1, 1998; 150(4): 1487 - 1495.
[Abstract] [Full Text]


Home page
GeneticsHome page
P. Zhang and R. L. Stankiewicz
Y-Linked Male Sterile Mutations Induced by P Element in Drosophila melanogaster
Genetics, October 1, 1998; 150(2): 735 - 744.
[Abstract] [Full Text]


Home page
J. Cell Biol.Home page
S. Gigliotti, G. Callaini, S. Andone, M. G. Riparbelli, R. Pernas-Alonso, G. Hoffmann, F. Graziani, and C. Malva
Nup154, a New Drosophila Gene Essential for Male and Female Gametogenesis Is Related to the Nup155 Vertebrate Nucleoporin Gene
J. Cell Biol., September 7, 1998; 142(5): 1195 - 1207.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
P. Carrera, S. Abrell, B. Kerber, U. Walldorf, A. Preiss, M. Hoch, and H. Jackle
A modifier screen in the eye reveals control genes for Kruppel activity in the Drosophila embryo
PNAS, September 1, 1998; 95(18): 10779 - 10784.
[Abstract] [Full Text] [PDF]


Home page